Factsheet for Os03t0132800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 18557835
plasma membrane: 19502382
plastid: 21433289
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0718300-01
Os04t0618700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	Os01t0718300-01	AT4G39400.1	18653891
AT4G35230.1	Os04t0618700-01	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0542800-01	Rice	cytosol, plasma membrane	17.33	89.32
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	84.37	86.99
Zm00001d027523_P001	Maize	plasma membrane	83.24	86.33
Zm00001d048345_P003	Maize	plastid	82.86	86.27
GSMUA_Achr11P...	Banana	cytosol	55.18	86.18
TraesCS4B01G328200.1	Wheat	plastid	84.75	86.04
EER95565	Sorghum	plastid	83.43	85.85
TraesCS5A01G500000.1	Wheat	plastid	83.99	85.11
TraesCS4D01G325200.1	Wheat	plastid	83.24	84.84
GSMUA_Achr5P11610_001	Banana	cytosol	76.46	80.88
GSMUA_Achr4P29650_001	Banana	cytosol	74.39	78.69
VIT_03s0038g03270.t01	Wine grape	cytosol	73.82	78.4
GSMUA_Achr5P19040_001	Banana	plasma membrane	76.84	78.31
CDX69121	Canola	cytosol	73.63	77.27
Bra011596.1-P	Field mustard	cytosol	73.82	76.56
CDX75483	Canola	cytosol	73.45	76.47
AT4G35230.1	Thale cress	cytosol	73.63	76.37
CDX76321	Canola	cytosol	72.69	76.13
Bra020806.1-P	Field mustard	cytosol	72.69	76.13
KRH14029	Soybean	cytosol	71.0	75.86
CDY17529	Canola	cytosol	72.32	75.74
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	72.88	75.44
KRH74087	Soybean	mitochondrion	71.94	75.05
Os10t0571300-01	Rice	plasma membrane	57.44	59.57
GSMUA_Achr1P02160_001	Banana	cytosol	57.25	56.09
Os03t0825300-03	Rice	plastid	49.53	53.89
Os04t0684200-01	Rice	plasma membrane	10.73	49.14
Bra034987.1-P	Field mustard	cytosol	14.88	48.77

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4	Gene3D:3.30.200.20
EntrezGene:4331518	ProteinID:ABF93827.1	EMBL:AK122069	ProteinID:BAF10784.1	ProteinID:BAS82153.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675
GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605
GO:GO:0009607	GO:GO:0009719	GO:GO:0009742	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	GO:GO:0045087	GO:GO:0050832
GO:GO:1900459	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os03g0132800	EnsemblPlants:Os03t0132800-01
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	UniProt:Q10S67
SUPFAM:SSF48452	SUPFAM:SSF56112	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0000DB40D1	RefSeq:XP_015632908.1	SEG:seg

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 98Similar to protein kinase-like protein [Oryza sativa (japonica cultivar-group)]. (Os03t0132800-01)

Coordinates

chr3:+:1852910..1857693

Molecular Weight (calculated)

59379.7 Da

IEP (calculated)

6.457

GRAVY (calculated)

-0.494

Length

531 amino acids

Sequence
(BLAST)

001: MGCCGSSLQA GTHPEKPPGM AAPPQRPSFS LNQHQAPGSA AAQGVGRGEV PAFAEFSLAE LRAATGGFAA ENIVSESGEK APNFVYRGRL QRTRRAIAVK
101: KFPKMAWPDP KQFEEEAKGV GKLRHRRLAN LIGYCCDGDE RLLVAEFMPN DTLAKHVFHW ENQTIEWAMR LRVAHHIAEA LDYCSSNERP LYHDLNAYRV
201: LFDENGDPRL SCFGLMKNSR DGKSYSTNLA YTPPEYLRNG RVTPESVIFS FGTVLLDLLS GKRIPPSHAL DMIRGKNIQV LLDSHLEGKY STEEATALVD
301: LASQCLQYEP RDRPNTGKLV SILDPLQTKL EVPSYEMLGI PKHEEEAPPA PAPAPAPQPQ HPLSPMGEAC SRMDMTAIHQ ILVATHYRDD EGTNELSFQE
401: WTQQMRDMLD ARKRGDFAFR DKDFKTAIEC YTQFVDVGTM VSPTVYARRS LCHLMSDQPD AALRDAMQAQ CVYPDWPTAF YMQAVALSKL NMQSDAMDML
501: NEASQLEEKR QERLWSKDAS AQSPLRLKGL C

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.