Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 6
- endoplasmic reticulum 1
- nucleus 1
- mitochondrion 1
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KXG40206 | Sorghum | cytosol | 98.97 | 98.72 |
TraesCS3A01G144500.1 | Wheat | cytosol | 58.33 | 85.37 |
TraesCS3D01G153800.1 | Wheat | cytosol | 74.23 | 85.15 |
TraesCS3D01G154000.1 | Wheat | cytosol | 85.51 | 84.64 |
TraesCS3B01G171200.1 | Wheat | cytosol | 85.38 | 84.52 |
TraesCS3A01G145000.1 | Wheat | cytosol | 75.13 | 84.2 |
TraesCS1B01G419200.1 | Wheat | cytosol | 85.13 | 84.16 |
TraesCS3B01G172100.1 | Wheat | cytosol | 85.13 | 84.05 |
TraesCS1B01G259200.1 | Wheat | cytosol | 85.0 | 84.03 |
TraesCS3B01G172000.1 | Wheat | cytosol | 84.36 | 83.93 |
TraesCS3B01G171400.1 | Wheat | cytosol | 78.21 | 83.91 |
TraesCS3A01G145100.1 | Wheat | cytosol | 84.87 | 83.9 |
TraesCS1D01G399100.1 | Wheat | cytosol | 84.87 | 83.9 |
TraesCS3B01G154400.1 | Wheat | cytosol | 84.74 | 83.88 |
TraesCS1D01G248000.1 | Wheat | cytosol | 84.49 | 83.52 |
HORVU0Hr1G006340.1 | Barley | cytosol | 83.97 | 83.12 |
KRG99061 | Soybean | cytosol | 21.15 | 82.5 |
TraesCS3D01G153900.1 | Wheat | cytosol | 82.95 | 82.11 |
KRG94277 | Soybean | cytosol | 21.67 | 81.64 |
TraesCS3B01G171300.1 | Wheat | cytosol | 76.03 | 81.34 |
HORVU3Hr1G029450.1 | Barley | cytosol | 83.97 | 81.06 |
EER94171 | Sorghum | cytosol | 84.1 | 80.99 |
VIT_08s0040g01480.t01 | Wine grape | cytosol | 83.46 | 80.77 |
KRH22853 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 83.46 | 80.67 |
KRH26511 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 83.46 | 80.67 |
KRG96011 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 83.46 | 80.57 |
EER92840 | Sorghum | cytosol | 83.59 | 80.49 |
HORVU3Hr1G029440.1 | Barley | cytosol | 83.97 | 80.47 |
KRH67721 | Soybean | endoplasmic reticulum, nucleus | 83.33 | 80.45 |
TraesCS6D01G360700.1 | Wheat | cytosol | 75.77 | 80.3 |
PGSC0003DMT400050662 | Potato | cytosol | 82.82 | 80.25 |
Solyc06g074980.2.1 | Tomato | nucleus | 82.82 | 80.25 |
Solyc11g069720.1.1 | Tomato | cytosol, extracellular, nucleus, plastid | 82.82 | 80.25 |
CDY13308 | Canola | cytosol | 83.21 | 80.12 |
CDY11249 | Canola | cytosol | 81.92 | 80.08 |
KRH19916 | Soybean | endoplasmic reticulum, mitochondrion | 83.21 | 80.02 |
Bra003123.1-P | Field mustard | cytosol | 83.08 | 80.0 |
PGSC0003DMT400031321 | Potato | cytosol | 82.56 | 80.0 |
TraesCS1A01G248500.1 | Wheat | cytosol | 61.15 | 79.9 |
KRH32530 | Soybean | endoplasmic reticulum, mitochondrion | 83.21 | 79.83 |
Bra034089.1-P | Field mustard | cytosol | 82.82 | 79.75 |
CDY07941 | Canola | cytosol | 82.69 | 79.73 |
CDY54618 | Canola | cytosol | 82.56 | 79.7 |
CDY22207 | Canola | cytosol | 82.69 | 79.63 |
CDY41316 | Canola | cytosol, extracellular | 82.69 | 79.63 |
CDX73996 | Canola | cytosol | 82.56 | 79.6 |
Bra001297.1-P | Field mustard | cytosol | 82.56 | 79.6 |
AT3G53230.1 | Thale cress | cytosol | 83.08 | 79.51 |
AT5G03340.1 | Thale cress | cytosol | 82.56 | 79.51 |
Bra029795.1-P | Field mustard | cytosol | 82.44 | 79.48 |
CDY41581 | Canola | cytosol | 82.31 | 79.46 |
AT3G09840.1 | Thale cress | cytosol | 82.31 | 79.36 |
PGSC0003DMT400027096 | Potato | cytosol | 82.18 | 79.33 |
Solyc10g084050.1.1 | Tomato | cytosol, nucleus, plastid, unclear | 82.05 | 79.21 |
PGSC0003DMT400055513 | Potato | cytosol | 81.79 | 79.06 |
CDX80862 | Canola | cytosol, plastid | 81.92 | 78.99 |
VIT_06s0061g00340.t01 | Wine grape | cytosol | 77.44 | 78.95 |
Bra006978.1-P | Field mustard | cytosol | 81.92 | 78.79 |
TraesCS5B01G323100.1 | Wheat | cytosol | 58.59 | 78.66 |
KRH30601 | Soybean | cytosol | 81.03 | 78.41 |
Solyc09g008070.2.1 | Tomato | cytosol, unclear | 80.38 | 77.6 |
CDX73571 | Canola | cytosol | 73.72 | 77.39 |
CDX78154 | Canola | cytosol | 73.46 | 77.02 |
KRH25081 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 70.13 | 75.55 |
GSMUA_Achr3P00250_001 | Banana | cytosol | 18.59 | 73.98 |
CDX67563 | Canola | cytosol | 81.54 | 72.35 |
EES14976 | Sorghum | cytosol | 65.51 | 64.52 |
KRH45638 | Soybean | cytosol | 25.38 | 61.68 |
Bra005733.1-P | Field mustard | cytosol | 82.31 | 58.15 |
KXG26645 | Sorghum | cytosol | 28.46 | 39.08 |
EES06471 | Sorghum | cytosol | 16.54 | 32.25 |
EER87717 | Sorghum | cytosol | 31.92 | 32.13 |
EER88627 | Sorghum | cytosol | 16.28 | 31.91 |
EES07646 | Sorghum | cytosol | 16.92 | 30.99 |
EES01223 | Sorghum | cytosol | 16.92 | 30.99 |
KXG39890 | Sorghum | cytosol | 16.54 | 30.71 |
EER91182 | Sorghum | cytosol | 16.41 | 30.48 |
KXG31298 | Sorghum | cytosol | 16.03 | 29.21 |
EER87942 | Sorghum | cytosol | 16.03 | 29.07 |
EES06492 | Sorghum | cytosol | 15.0 | 27.73 |
EER88603 | Sorghum | cytosol | 14.62 | 27.21 |
EER99961 | Sorghum | cytosol | 15.26 | 26.62 |
EES09632 | Sorghum | cytosol, plastid | 32.69 | 25.81 |
EES12865 | Sorghum | mitochondrion | 27.44 | 23.06 |
EES15200 | Sorghum | cytosol | 24.1 | 17.18 |
Protein Annotations
Gene3D:1.10.8.60 | MapMan:19.2.4.2.1 | Gene3D:2.40.40.20 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
InterPro:AAA_ATPase_CDC48 | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | UniProt:C5WYU4 | InterPro:CDC48_domain_2-like_sf |
InterPro:CDC4_N-term_subdom | InterPro:Cdc48_dom2 | ncoils:Coil | EnsemblPlants:EER95525 | ProteinID:EER95525 | ProteinID:EER95525.1 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 |
InterPro:P-loop_NTPase | PFAM:PF00004 | PFAM:PF02359 | PFAM:PF02933 | ScanProsite:PS00674 | PANTHER:PTHR23077 |
PANTHER:PTHR23077:SF122 | SMART:SM00382 | SMART:SM01072 | SMART:SM01073 | EnsemblPlantsGene:SORBI_3001G508000 | SUPFAM:SSF50692 |
SUPFAM:SSF52540 | SUPFAM:SSF54585 | TIGRFAMs:TIGR01243 | UniParc:UPI0001A830D9 | RefSeq:XP_002468527.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:77588448..77591097
Molecular Weight (calculated)
86044.0 Da
IEP (calculated)
5.129
GRAVY (calculated)
-0.279
Length
780 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKAANKLVV EEPTNDDVSI CNLHPATMEK LSIYHGDVVL LKGKRRRDTI CIAMNNEGCG EHALGINRSV RSNLRVRLGD VVSVHPCHDA AYGAKVHVLP
101: LDDTVEGLTG DLFEAYLKPH FLNAYRPVRK GDLFLVRGGM RSVEFKVVDI HPPAEYCIVA DDTVVFCDGE PVKREDEERL DGVGYDDVGG MRKQLAQIRE
201: LVELPLRHPQ LFKSIGVKPP KGILLYGPPG SGKTLIARAV ANETGAFFFC INGPEIMSKL AGESESNLRK AFQEAEKNAP SIIFIDEIDS IAPKREKTHG
301: EVERRIVSQL LTLMDGLKTR AHVIVMGATN RPNSIDPALR RFGRFDREID IGVPDEVGRL EVLRVHTKNM KLAEDVNLEA VSKDTHGYVG ADLAALCTEA
401: ALQCIREKMD VIDLEDDTID AEILNSMAIT NDHLKTALAG TNPSALRETV VEVPNVSWAD IGGLEGVKRE LQETVQYPVE HPDMFEKFGM SPSRGVLFYG
501: PPGCGKTLLA KAIANECQAN FISVKGPELL TMWFGESEAN VRDIFDKARQ SAPCVLFFDE LDSIAMQRGS HVGDAGGAAD RVLNQLLTEM DGMSAKKTVF
601: IIGATNRPDI IDPALLRPGR LDQLIYIPLP DEASRQQIFK ACLRKSPVAK NVDLGALARF TAGFSGADIT EICQRACKYA IREDIEKDIE RERKAKENPG
701: EMAVDCADDE PAQIGAVHFE ESMRYARRSV SDADIRKYQA FAQTLQQSRG FGTEFRFPIR PQQAAEAEAA ADSEEDDIYS
101: LDDTVEGLTG DLFEAYLKPH FLNAYRPVRK GDLFLVRGGM RSVEFKVVDI HPPAEYCIVA DDTVVFCDGE PVKREDEERL DGVGYDDVGG MRKQLAQIRE
201: LVELPLRHPQ LFKSIGVKPP KGILLYGPPG SGKTLIARAV ANETGAFFFC INGPEIMSKL AGESESNLRK AFQEAEKNAP SIIFIDEIDS IAPKREKTHG
301: EVERRIVSQL LTLMDGLKTR AHVIVMGATN RPNSIDPALR RFGRFDREID IGVPDEVGRL EVLRVHTKNM KLAEDVNLEA VSKDTHGYVG ADLAALCTEA
401: ALQCIREKMD VIDLEDDTID AEILNSMAIT NDHLKTALAG TNPSALRETV VEVPNVSWAD IGGLEGVKRE LQETVQYPVE HPDMFEKFGM SPSRGVLFYG
501: PPGCGKTLLA KAIANECQAN FISVKGPELL TMWFGESEAN VRDIFDKARQ SAPCVLFFDE LDSIAMQRGS HVGDAGGAAD RVLNQLLTEM DGMSAKKTVF
601: IIGATNRPDI IDPALLRPGR LDQLIYIPLP DEASRQQIFK ACLRKSPVAK NVDLGALARF TAGFSGADIT EICQRACKYA IREDIEKDIE RERKAKENPG
701: EMAVDCADDE PAQIGAVHFE ESMRYARRSV SDADIRKYQA FAQTLQQSRG FGTEFRFPIR PQQAAEAEAA ADSEEDDIYS
001: MSNEPESSDS KTKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPTTM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDEVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV SNEHFHTALG NSNPSALRET VVEVPNVSWE DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG NSAGDAGGAA
601: DRVLNQLLTE MDGMNAKKTV FIIGATNRPD IIDSALLRPG RLDQLIYIPL PDEDSRLNIF KACLRKSPVA KDVDVTALAK YTQGFSGADI TEICQRACKY
701: AIRENIEKDI ENERRRSQNP EAMEEDMVDD EVSEIRAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFDS TAGVGRTTGV AAADPFATSA
801: AAADDDDLYS
Arabidopsis Description
CDC48ECell division control protein 48 homolog E [Source:UniProtKB/Swiss-Prot;Acc:Q9LZF6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.