CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025776_P002	Maize	cytosol	92.25	92.25
TraesCS2B01G373100.1	Wheat	cytosol	81.69	81.55
TraesCS2A01G355200.1	Wheat	cytosol	81.34	81.48
HORVU2Hr1G086170.2	Barley	cytosol	81.51	81.37
TraesCS2D01G353100.1	Wheat	cytosol	81.16	81.16
Os05t0376200-00	Rice	cytosol	54.23	78.77
Os04t0498800-01	Rice	cytosol	76.41	75.09
GSMUA_Achr6P11080_001	Banana	plastid	71.83	68.11
Solyc05g012190.2.1	Tomato	cytosol	66.9	62.19
PGSC0003DMT400072919	Potato	cytosol	66.73	62.03
KRH70928	Soybean	cytosol	65.32	61.22
AT2G03670.1	Thale cress	cytosol	64.79	61.03
CDY04161	Canola	cytosol	63.91	60.2
Bra017378.1-P	Field mustard	cytosol	63.73	60.03
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	63.91	50.7
EER88627	Sorghum	cytosol	21.48	30.65
EES06471	Sorghum	cytosol	21.3	30.25
CDY02982	Canola	cytosol	62.15	29.94
EES06492	Sorghum	cytosol	21.83	29.38
EER91182	Sorghum	cytosol	21.48	29.05
EER87717	Sorghum	cytosol	39.61	29.03
EER87942	Sorghum	cytosol	21.83	28.84
KXG31298	Sorghum	cytosol	21.65	28.74
EER88603	Sorghum	cytosol	21.13	28.64
KXG39890	Sorghum	cytosol	21.13	28.57
EER95525	Sorghum	cytosol	39.08	28.46
EES14976	Sorghum	cytosol	39.61	28.41
KXG40206	Sorghum	cytosol	39.08	28.39
EES01223	Sorghum	cytosol	21.13	28.17
EES07646	Sorghum	cytosol	21.13	28.17
EER99961	Sorghum	cytosol	22.01	27.96
EER92840	Sorghum	cytosol	39.08	27.41
EER94171	Sorghum	cytosol	38.91	27.28
EES09632	Sorghum	cytosol, plastid	38.03	21.86
EES12865	Sorghum	mitochondrion	29.58	18.1
EES15200	Sorghum	cytosol	29.23	15.17

Protein Annotations

Gene3D:1.10.8.60	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1B6PLU7	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlants:KXG26645
ProteinID:KXG26645	ProteinID:KXG26645.1	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23077
PANTHER:PTHR23077:SF117	SMART:SM00382	EnsemblPlantsGene:SORBI_3006G135900	SUPFAM:SSF52540	UniParc:UPI00081AEAA2	SEG:seg

Description

hypothetical protein

Coordinates

chr6:+:49875450..49879336

Molecular Weight (calculated)

61979.4 Da

IEP (calculated)

8.216

GRAVY (calculated)

-0.220

Length

568 amino acids

Sequence
(BLAST)

001: MSTASVSDDG GWVSGGKSAD GWRAEEAVAG NRRALEALRE LVAYPFLYAR ESRLLGLKWP RGLLLHGPPG TGKTSLVRAI VRECNAHLIM INPYSVHKAH
101: VGEGEKFLRE AFSEAYSQAS RGKPAVIFID ELDAICPRRN ARRENESRIV GQLLTLMDGN KKSSKMLPHI VVVASTNRVD AIDPALRRAG RFDSEVEVSV
201: PTVEERLQIL KLYAKNLHMD EKVDLQTVAA FCNGYVGADL EALCREAAKL AYHRMLNISE GDRVLKLHME DWESARSMVG PSITRGITKE ISTVSWDDIG
301: GLKDLKKELQ KAVEWPIKHA DAFSRLGIPP VRGVLLHGPP GCSKTTLAKA AAHASRASFF SLSGADLYSK YVGEGEALLR RTFQKARLAS PSIIFFDEAD
401: AIAPKRTGSG GNSSGNATVG ERLLSTLLTE MDGLELATGI LVLGATNRPN AIDAALLRPG RFDKVLYVPP PDVEGRYEIL RIHTQKMKLG EDVDLWKIAE
501: CTELFTGADL EGLCREAGMA ALREDISASS ICNTHFQAAR SSLNPSLTKA LVDEYSKAAI NDPSSRKH

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.