Factsheet for TraesCS2D01G353100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G373100.1	Wheat	cytosol	99.12	98.95
TraesCS2A01G355200.1	Wheat	cytosol	97.36	97.53
HORVU2Hr1G086170.2	Barley	cytosol	96.48	96.31
Os05t0376200-00	Rice	cytosol	57.04	82.86
Zm00001d025776_P002	Maize	cytosol	82.04	82.04
KXG26645	Sorghum	cytosol	81.16	81.16
Os04t0498800-01	Rice	cytosol	79.93	78.55
GSMUA_Achr6P11080_001	Banana	plastid	73.24	69.45
KRH70928	Soybean	cytosol	66.2	62.05
Solyc05g012190.2.1	Tomato	cytosol	65.85	61.21
PGSC0003DMT400072919	Potato	cytosol	65.67	61.05
AT2G03670.1	Thale cress	cytosol	63.38	59.7
CDY04161	Canola	cytosol	63.2	59.54
Bra017378.1-P	Field mustard	cytosol	63.03	59.37
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	62.85	49.86
TraesCS1D01G194500.1	Wheat	cytosol	17.96	38.49
TraesCS1D01G340100.1	Wheat	cytosol	16.73	37.11
TraesCS3D01G153300.1	Wheat	cytosol	14.44	36.61
TraesCS3D01G153800.1	Wheat	cytosol	38.2	31.91
TraesCS6D01G149500.1	Wheat	cytosol	19.37	30.56
TraesCS7D01G375500.1	Wheat	cytosol	21.13	30.0
TraesCS3D01G154000.1	Wheat	cytosol	41.55	29.95
TraesCS7D01G350300.1	Wheat	cytosol	22.01	29.55
TraesCS1D01G399100.1	Wheat	cytosol	41.02	29.53
TraesCS2D01G083900.1	Wheat	golgi	21.48	29.4
TraesCS1D01G248000.1	Wheat	cytosol	40.67	29.28
TraesCS2D01G476000.1	Wheat	cytosol	21.48	29.26
TraesCS6D01G360700.1	Wheat	cytosol	37.85	29.21
TraesCS6D01G166700.1	Wheat	cytosol, golgi	21.48	29.19
TraesCS7D01G023600.1	Wheat	mitochondrion	40.32	29.17
TraesCS1D01G223800.1	Wheat	cytosol	41.02	29.12
TraesCS5D01G081900.1	Wheat	mitochondrion	38.03	29.07
CDY02982	Canola	cytosol	60.21	29.01
TraesCS3D01G153900.1	Wheat	cytosol	40.14	28.93
TraesCS7D01G134800.1	Wheat	cytosol	21.83	28.9
TraesCS7D01G532000.1	Wheat	cytosol	20.25	28.89
TraesCS3D01G443600.1	Wheat	mitochondrion	38.03	28.88
TraesCS1D01G253100.1	Wheat	cytosol	40.67	28.88
TraesCS7D01G157200.1	Wheat	cytosol	21.65	28.87
TraesCS3D01G417000.1	Wheat	cytosol	22.01	28.8
TraesCS4D01G267800.1	Wheat	cytosol	40.85	28.54
TraesCS6D01G326400.1	Wheat	cytosol	21.3	28.4
TraesCS4D01G267600.2	Wheat	cytosol	40.67	28.24
TraesCS4D01G190600.1	Wheat	cytosol, golgi	22.18	28.0
TraesCS2D01G087900.1	Wheat	cytosol, golgi	21.83	27.62
TraesCS2D01G471200.1	Wheat	cytosol	21.83	27.37
TraesCS1D01G073600.1	Wheat	cytosol, plastid	40.85	23.08
TraesCS4D01G105500.2	Wheat	cytosol, plastid	40.67	22.96
TraesCS2D01G458300.3	Wheat	mitochondrion	27.82	16.93
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	28.87	15.05
TraesCS5D01G306600.2	Wheat	mitochondrion	27.82	14.44

Protein Annotations

EnsemblPlants:TraesCS2D01G353100.1	EnsemblPlantsGene:TraesCS2D01G353100	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23077	PANTHER:PTHR23077:SF117	PFAM:PF00004	PRINTS:PR00830	ScanProsite:PS00674	SEG:seg
SMART:SM00382	SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:+:451455106..451459160

Molecular Weight (calculated)

62048.6 Da

IEP (calculated)

8.552

GRAVY (calculated)

-0.235

Length

568 amino acids

Sequence
(BLAST)

001: MGEVMAARSR GGTNGEDGEP VARWRAEEAV AGNRMALQAL RELVIYPFLY ARQSRLLGLK WPRGLLLYGP PGTGKTSLVQ AIVRECSAHL TMINTYSVHK
101: AHAGEGEKFL REAFSEAYSQ ASQGRPAIIF IDELDGICPR RNSRREQESR IVGQLLTLMD GNKKLSKKLP HVVVVASTNR VDAIDPALRR PGRFDSEIEV
201: TVPTVEERLQ ILKLYSKNLH LDENVDLQII AGWCNGYVGA DLEALCREAA RLAYRRLSNS SEDGKVLTLL MEDWESARSQ IKASMIRGVT KEAPTVSWDD
301: IGGLKDLKKK LQQAVEWPIK HAAAFARLGI SPVRGVLLHG PPGCSKTTLA KAAAHAAQAS FFSLSGAELY SKYVGEGEAL LRRTFQRARL SSPSIIFFDE
401: ADAIAPKRTG PSGDSGNATV GERLLSTLLT EMDGLELATG IIVLAATNRP KAIDAALLRP GRFDMVLYVP PPDAQGRHEI LRIHTRKMKL GEDVDLGEIA
501: ERTELFTGAD LEGLCREAGM AALREDLSAS SIHKAHFEAA IRSLRPSLTK TEVDEDAAAA IHGPARKN

Best Arabidopsis Sequence Match ( AT2G03670.1 )
(BLAST)

001: MLETESSVCD NIAGNEKWRA EAEIGGNERA LQALRELIIF PFRYPLEART LGLKWPRGLL LYGPPGTGKT SLVRAVVQEC DAHLIVLSPH SVHRAHAGES
101: EKVLREAFAE ASSHAVSDKP SVIFIDEIDV LCPRRDARRE QDVRIASQLF TLMDSNKPSS SAPRVVVVAS TNRVDAIDPA LRRAGRFDAL VEVSTPNEED
201: RLKILQLYTK KVNLDPSVDL QAIAISCNGY VGADLEALCR EATISASKRS SDSLILTSQD FKIAKSVVGP SINRGITVEI PKVTWDDVGG LKDLKKKLQQ
301: AVEWPIKHSA AFVKMGISPM RGILLHGPPG CSKTTLAKAA ANAAQASFFS LSCAELFSMY VGEGEALLRN TFQRARLASP SIIFFDEADV VACKRGDESS
401: SNSSTVGERL LSTLLTEMDG LEEAKGILVL AATNRPYAID AALMRPGRFD LVLYVPPPDL EARFEILQVH TRNMTLGDDV DLRKIAEETD LFTGAELEGL
501: CRESGTVSLR ENIAATAVFN RHFQTAKSSL KPALTIEEVE TYSSFRKAAK RSDSKPIPIN KKKATSTVFG FSWQLGVLSL LLLATGNYYF NHTKHELLVA
601: SAT

Arabidopsis Description

CDC48BCell division control protein 48 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.