Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G171400.1 | Wheat | cytosol | 95.0 | 88.86 |
TraesCS3D01G153900.1 | Wheat | cytosol | 95.29 | 82.23 |
TraesCS1D01G248000.1 | Wheat | cytosol | 95.0 | 81.88 |
TraesCS1D01G399100.1 | Wheat | cytosol | 95.0 | 81.88 |
HORVU0Hr1G006340.1 | Barley | cytosol | 94.41 | 81.47 |
TraesCS3D01G154000.1 | Wheat | cytosol | 94.26 | 81.35 |
TraesCS6D01G360700.1 | Wheat | cytosol | 86.18 | 79.62 |
HORVU3Hr1G029450.1 | Barley | cytosol | 94.41 | 79.46 |
HORVU3Hr1G029440.1 | Barley | cytosol | 94.41 | 78.87 |
EER95525 | Sorghum | cytosol | 85.15 | 74.23 |
KXG40206 | Sorghum | cytosol | 85.0 | 73.91 |
TraesCS1D01G223800.1 | Wheat | cytosol | 84.71 | 72.0 |
TraesCS4D01G267800.1 | Wheat | cytosol | 85.29 | 71.34 |
TraesCS1D01G253100.1 | Wheat | cytosol | 83.82 | 71.25 |
TraesCS4D01G267600.2 | Wheat | cytosol | 85.59 | 71.15 |
TraesCS3D01G153300.1 | Wheat | cytosol | 22.79 | 69.2 |
TraesCS1D01G340100.1 | Wheat | cytosol | 25.0 | 66.41 |
TraesCS1D01G194500.1 | Wheat | cytosol | 24.56 | 63.02 |
GSMUA_Achr3P00250_001 | Banana | cytosol | 11.03 | 38.27 |
TraesCS2D01G353100.1 | Wheat | cytosol | 31.91 | 38.2 |
TraesCS6D01G149500.1 | Wheat | cytosol | 17.06 | 32.22 |
TraesCS5D01G081900.1 | Wheat | mitochondrion | 34.56 | 31.63 |
TraesCS7D01G375500.1 | Wheat | cytosol | 18.38 | 31.25 |
TraesCS3D01G443600.1 | Wheat | mitochondrion | 33.82 | 30.75 |
TraesCS7D01G532000.1 | Wheat | cytosol | 17.94 | 30.65 |
TraesCS7D01G157200.1 | Wheat | cytosol | 18.97 | 30.28 |
TraesCS6D01G326400.1 | Wheat | cytosol | 18.53 | 29.58 |
TraesCS7D01G023600.1 | Wheat | mitochondrion | 34.12 | 29.55 |
TraesCS2D01G476000.1 | Wheat | cytosol | 17.79 | 29.02 |
TraesCS2D01G083900.1 | Wheat | golgi | 17.5 | 28.67 |
TraesCS3D01G417000.1 | Wheat | cytosol | 17.21 | 26.96 |
TraesCS7D01G134800.1 | Wheat | cytosol | 16.76 | 26.57 |
TraesCS6D01G166700.1 | Wheat | cytosol, golgi | 16.18 | 26.32 |
TraesCS2D01G471200.1 | Wheat | cytosol | 17.5 | 26.27 |
TraesCS7D01G350300.1 | Wheat | cytosol | 16.18 | 26.0 |
TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 17.06 | 25.84 |
TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 17.06 | 25.78 |
TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 36.32 | 24.55 |
TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 36.03 | 24.38 |
TraesCS2D01G458300.3 | Wheat | mitochondrion | 28.97 | 21.11 |
TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 25.44 | 15.87 |
TraesCS5D01G306600.2 | Wheat | mitochondrion | 25.15 | 15.63 |
Protein Annotations
Gene3D:1.10.8.60 | MapMan:19.2.4.2.1 | Gene3D:2.40.40.20 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | InterPro:Asp_de-COase-like_dom_sf | InterPro:CDC48_domain_2-like_sf | InterPro:CDC4_N-term_subdom | InterPro:Cdc48_dom2 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | InterPro:P-loop_NTPase | PFAM:PF00004 |
PFAM:PF02359 | PFAM:PF02933 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF122 | SMART:SM00382 |
SMART:SM01072 | SMART:SM01073 | SUPFAM:SSF50692 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | EnsemblPlantsGene:TraesCS3D01G153800 |
EnsemblPlants:TraesCS3D01G153800.1 | TIGR:cd00009 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:121266679..121268721
Molecular Weight (calculated)
74937.3 Da
IEP (calculated)
5.236
GRAVY (calculated)
-0.164
Length
680 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAATLKKA ANRLVVEEAA TNDDNSVCTL HPHTMEKLSI FKGDIVLLKG KRRHNTVCMA LPDDTCEEHK LRINKVARSN LRVRIADVVS VHLCHDAEFG
101: RRVHILPLDD TVEGIAGNLF DVYLKPYFVD AYRPLHKGDL FLVRGGMRSV EFKVMEIDPA VEYCIVAPDT EIFCEGEPVK REDEERLDDI GYDDVGGMGK
201: PLTLMRELVE LPLRHPQIFK SIGVKPPKGI LLYGPPVSGK TLIARAVANK TGAFFFLING PEIMSKMAGE SESNLRKAFE EAEKNTPSII FIDEIDSIAP
301: NREKTHGEVE RRIVSQLLTL MDGTKARAHV IVMGATNHPN SIDPALRRFG RFDREIDIGV PDEVGRLEVL RIHTKNMKLD EDVNLEVVAK DTHGYVGADL
401: AALCTEAALQ CIREKMDVID LEDDTIDAEI LNSMAVTNDH LKTALVGTNP SALRETVAEV PNVSWTDIGG LDGVKRELQE TVQYPVEHPE KFEKFGMSPS
501: KGVLFYGPPG CGKTLLAKAI ANECQANFIS IKGPELLTMW FGESEANVRE IFDKARQSAP CVLFFDELDS IATQRGGRVG DAGSAADRVL NQLLTEMDGM
601: NAKKTVFIIG ATNSPDIIDS ALLRPGRLDQ LIYIPLPDEA SRHQIFKACL RKSPVAKDVD LGALARFTSG FSGADITEIC
101: RRVHILPLDD TVEGIAGNLF DVYLKPYFVD AYRPLHKGDL FLVRGGMRSV EFKVMEIDPA VEYCIVAPDT EIFCEGEPVK REDEERLDDI GYDDVGGMGK
201: PLTLMRELVE LPLRHPQIFK SIGVKPPKGI LLYGPPVSGK TLIARAVANK TGAFFFLING PEIMSKMAGE SESNLRKAFE EAEKNTPSII FIDEIDSIAP
301: NREKTHGEVE RRIVSQLLTL MDGTKARAHV IVMGATNHPN SIDPALRRFG RFDREIDIGV PDEVGRLEVL RIHTKNMKLD EDVNLEVVAK DTHGYVGADL
401: AALCTEAALQ CIREKMDVID LEDDTIDAEI LNSMAVTNDH LKTALVGTNP SALRETVAEV PNVSWTDIGG LDGVKRELQE TVQYPVEHPE KFEKFGMSPS
501: KGVLFYGPPG CGKTLLAKAI ANECQANFIS IKGPELLTMW FGESEANVRE IFDKARQSAP CVLFFDELDS IATQRGGRVG DAGSAADRVL NQLLTEMDGM
601: NAKKTVFIIG ATNSPDIIDS ALLRPGRLDQ LIYIPLPDEA SRHQIFKACL RKSPVAKDVD LGALARFTSG FSGADITEIC
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.