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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G171400.1 Wheat cytosol 95.0 88.86
TraesCS3D01G153900.1 Wheat cytosol 95.29 82.23
TraesCS1D01G248000.1 Wheat cytosol 95.0 81.88
TraesCS1D01G399100.1 Wheat cytosol 95.0 81.88
HORVU0Hr1G006340.1 Barley cytosol 94.41 81.47
TraesCS3D01G154000.1 Wheat cytosol 94.26 81.35
TraesCS6D01G360700.1 Wheat cytosol 86.18 79.62
HORVU3Hr1G029450.1 Barley cytosol 94.41 79.46
HORVU3Hr1G029440.1 Barley cytosol 94.41 78.87
EER95525 Sorghum cytosol 85.15 74.23
KXG40206 Sorghum cytosol 85.0 73.91
TraesCS1D01G223800.1 Wheat cytosol 84.71 72.0
TraesCS4D01G267800.1 Wheat cytosol 85.29 71.34
TraesCS1D01G253100.1 Wheat cytosol 83.82 71.25
TraesCS4D01G267600.2 Wheat cytosol 85.59 71.15
TraesCS3D01G153300.1 Wheat cytosol 22.79 69.2
TraesCS1D01G340100.1 Wheat cytosol 25.0 66.41
TraesCS1D01G194500.1 Wheat cytosol 24.56 63.02
GSMUA_Achr3P00250_001 Banana cytosol 11.03 38.27
TraesCS2D01G353100.1 Wheat cytosol 31.91 38.2
TraesCS6D01G149500.1 Wheat cytosol 17.06 32.22
TraesCS5D01G081900.1 Wheat mitochondrion 34.56 31.63
TraesCS7D01G375500.1 Wheat cytosol 18.38 31.25
TraesCS3D01G443600.1 Wheat mitochondrion 33.82 30.75
TraesCS7D01G532000.1 Wheat cytosol 17.94 30.65
TraesCS7D01G157200.1 Wheat cytosol 18.97 30.28
TraesCS6D01G326400.1 Wheat cytosol 18.53 29.58
TraesCS7D01G023600.1 Wheat mitochondrion 34.12 29.55
TraesCS2D01G476000.1 Wheat cytosol 17.79 29.02
TraesCS2D01G083900.1 Wheat golgi 17.5 28.67
TraesCS3D01G417000.1 Wheat cytosol 17.21 26.96
TraesCS7D01G134800.1 Wheat cytosol 16.76 26.57
TraesCS6D01G166700.1 Wheat cytosol, golgi 16.18 26.32
TraesCS2D01G471200.1 Wheat cytosol 17.5 26.27
TraesCS7D01G350300.1 Wheat cytosol 16.18 26.0
TraesCS2D01G087900.1 Wheat cytosol, golgi 17.06 25.84
TraesCS4D01G190600.1 Wheat cytosol, golgi 17.06 25.78
TraesCS4D01G105500.2 Wheat cytosol, plastid 36.32 24.55
TraesCS1D01G073600.1 Wheat cytosol, plastid 36.03 24.38
TraesCS2D01G458300.3 Wheat mitochondrion 28.97 21.11
TraesCS7D01G277100.1 Wheat cytosol, peroxisome, plastid 25.44 15.87
TraesCS5D01G306600.2 Wheat mitochondrion 25.15 15.63
Protein Annotations
Gene3D:1.10.8.60MapMan:19.2.4.2.1Gene3D:2.40.40.20Gene3D:3.10.330.10Gene3D:3.40.50.300InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreInterPro:Asp_de-COase-like_dom_sfInterPro:CDC48_domain_2-like_sfInterPro:CDC4_N-term_subdomInterPro:Cdc48_dom2
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:P-loop_NTPasePFAM:PF00004
PFAM:PF02359PFAM:PF02933ScanProsite:PS00674PANTHER:PTHR23077PANTHER:PTHR23077:SF122SMART:SM00382
SMART:SM01072SMART:SM01073SUPFAM:SSF50692SUPFAM:SSF52540SUPFAM:SSF54585EnsemblPlantsGene:TraesCS3D01G153800
EnsemblPlants:TraesCS3D01G153800.1TIGR:cd00009::::
Description
No Description!
Coordinates
chr3D:-:121266679..121268721
Molecular Weight (calculated)
74937.3 Da
IEP (calculated)
5.236
GRAVY (calculated)
-0.164
Length
680 amino acids
Sequence
(BLAST)
001: MASAATLKKA ANRLVVEEAA TNDDNSVCTL HPHTMEKLSI FKGDIVLLKG KRRHNTVCMA LPDDTCEEHK LRINKVARSN LRVRIADVVS VHLCHDAEFG
101: RRVHILPLDD TVEGIAGNLF DVYLKPYFVD AYRPLHKGDL FLVRGGMRSV EFKVMEIDPA VEYCIVAPDT EIFCEGEPVK REDEERLDDI GYDDVGGMGK
201: PLTLMRELVE LPLRHPQIFK SIGVKPPKGI LLYGPPVSGK TLIARAVANK TGAFFFLING PEIMSKMAGE SESNLRKAFE EAEKNTPSII FIDEIDSIAP
301: NREKTHGEVE RRIVSQLLTL MDGTKARAHV IVMGATNHPN SIDPALRRFG RFDREIDIGV PDEVGRLEVL RIHTKNMKLD EDVNLEVVAK DTHGYVGADL
401: AALCTEAALQ CIREKMDVID LEDDTIDAEI LNSMAVTNDH LKTALVGTNP SALRETVAEV PNVSWTDIGG LDGVKRELQE TVQYPVEHPE KFEKFGMSPS
501: KGVLFYGPPG CGKTLLAKAI ANECQANFIS IKGPELLTMW FGESEANVRE IFDKARQSAP CVLFFDELDS IATQRGGRVG DAGSAADRVL NQLLTEMDGM
601: NAKKTVFIIG ATNSPDIIDS ALLRPGRLDQ LIYIPLPDEA SRHQIFKACL RKSPVAKDVD LGALARFTSG FSGADITEIC
Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)
001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE
Arabidopsis Description
CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.