Factsheet for TraesCS3D01G153900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G153800.1	Wheat	cytosol	82.23	95.29
TraesCS3B01G172000.1	Wheat	cytosol	94.16	94.64
TraesCS3A01G144500.1	Wheat	cytosol	62.94	93.06
TraesCS1D01G399100.1	Wheat	cytosol	93.15	93.03
TraesCS3D01G154000.1	Wheat	cytosol	93.02	93.02
TraesCS1D01G248000.1	Wheat	cytosol	93.02	92.9
TraesCS3D01G153300.1	Wheat	cytosol	26.4	92.86
HORVU0Hr1G006340.1	Barley	cytosol	92.64	92.64
HORVU3Hr1G029450.1	Barley	cytosol	92.64	90.35
HORVU3Hr1G029440.1	Barley	cytosol	92.64	89.68
TraesCS6D01G360700.1	Wheat	cytosol	83.25	89.13
TraesCS1D01G340100.1	Wheat	cytosol	28.93	89.06
TraesCS1A01G248500.1	Wheat	cytosol	67.39	88.94
TraesCS1D01G194500.1	Wheat	cytosol	28.93	86.04
EER95525	Sorghum	cytosol	82.11	82.95
KXG40206	Sorghum	cytosol	82.11	82.74
TraesCS1D01G223800.1	Wheat	cytosol	81.47	80.25
TraesCS4D01G267800.1	Wheat	cytosol	82.74	80.2
TraesCS4D01G267600.2	Wheat	cytosol	82.99	79.95
TraesCS1D01G253100.1	Wheat	cytosol	80.84	79.62
GSMUA_Achr3P00250_001	Banana	cytosol	18.15	72.96
TraesCS2D01G353100.1	Wheat	cytosol	28.93	40.14
TraesCS6D01G149500.1	Wheat	cytosol	15.23	33.33
TraesCS5D01G081900.1	Wheat	mitochondrion	31.35	33.24
TraesCS3D01G443600.1	Wheat	mitochondrion	30.96	32.62
TraesCS7D01G375500.1	Wheat	cytosol	16.37	32.25
TraesCS7D01G157200.1	Wheat	cytosol	17.26	31.92
TraesCS7D01G532000.1	Wheat	cytosol	15.99	31.66
TraesCS6D01G326400.1	Wheat	cytosol	17.01	31.46
TraesCS7D01G023600.1	Wheat	mitochondrion	30.71	30.83
TraesCS2D01G476000.1	Wheat	cytosol	15.99	30.22
TraesCS2D01G083900.1	Wheat	golgi	15.74	29.88
TraesCS3D01G417000.1	Wheat	cytosol	15.86	28.8
TraesCS7D01G134800.1	Wheat	cytosol	15.23	27.97
TraesCS6D01G166700.1	Wheat	cytosol, golgi	14.72	27.75
TraesCS7D01G350300.1	Wheat	cytosol	14.72	27.42
TraesCS2D01G471200.1	Wheat	cytosol	15.74	27.37
TraesCS4D01G190600.1	Wheat	cytosol, golgi	15.1	26.44
TraesCS2D01G087900.1	Wheat	cytosol, golgi	14.85	26.06
TraesCS4D01G105500.2	Wheat	cytosol, plastid	32.23	25.25
TraesCS1D01G073600.1	Wheat	cytosol, plastid	32.11	25.17
TraesCS2D01G458300.3	Wheat	mitochondrion	26.27	22.19
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	23.1	16.7
TraesCS5D01G306600.2	Wheat	mitochondrion	22.84	16.45

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.4.2.1	Gene3D:2.40.40.20	Gene3D:3.10.330.10	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:Asp_de-COase-like_dom_sf	InterPro:CDC48_domain_2-like_sf	InterPro:CDC4_N-term_subdom	InterPro:Cdc48_dom2
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:P-loop_NTPase	PFAM:PF00004
PFAM:PF02359	PFAM:PF02933	ScanProsite:PS00674	PANTHER:PTHR23077	PANTHER:PTHR23077:SF122	SMART:SM00382
SMART:SM01072	SMART:SM01073	SUPFAM:SSF50692	SUPFAM:SSF52540	SUPFAM:SSF54585	EnsemblPlantsGene:TraesCS3D01G153900
EnsemblPlants:TraesCS3D01G153900.1	TIGR:cd00009	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:121332310..121334676

Molecular Weight (calculated)

87134.7 Da

IEP (calculated)

5.449

GRAVY (calculated)

-0.251

Length

788 amino acids

Sequence
(BLAST)

001: MASAATSKKA ANRLVVEEAA TNDDNSVCTL HPDTMEKLSI FKGDIVLLKG KRRHNTVCVA LPDDTCEEHK LRINKVARSN LRVRIADVVS VHLCHDAKFG
101: RRVHILPLDN TVEGIAGNLL DVYLKPYFVD AYRPLHKGDL FLVRRGMRSV EFKVMEIDPA VEYCIVAPDI EIFYEGDPVK REDEERLDDI GYDDVGGMGK
201: PLTLIRELVE LLLRHPQIFK SIGVKPPKGI LLYGPPGSGK TLIARAVANE TGAFFFLING PEIMSKMAGE SESNLRKAFE EAEKNAPSII FIDEIDSIAP
301: NREKTHGEVE RRIVSQLLTR MDGMKARAHV IVMGATNRLN SIDPALRRFG RFDREINIGV PDEVGRLKVL RIHTKNMKLD EDVNLEVVPK DTHGYVGADL
401: AALCTEAALQ CIREKMDVID LEDDTIDAEI LNSMAVTNDH LKTALVGTNP SALRETVVEV PNVSWTDIGG LGGVKRELQE TVKYPVEHPE KFEKFGMSPS
501: KGVLFYGPPG CGKTLLAKAI VNECQANFIS IKGPELLTMW FGESEANVRE IFDKARQSAP CVLFFDELDS IATQRGGRVG DAGGAADRVL NQLLTGMDGM
601: NAKKTVYIIG ATNRPNIIDS ALLRPGCLDQ LIYIPLPDEA SRHQIFKACL RKSPVAKDVD LGALARFTSG FSGADITEIC QRACKYAIRE DIEKDMERQR
701: MGKDTMEVDG GLEDEVAEIK VAHFEESMKY ARRSVSDAAI RKYQAFAQTL QQSRGFGTEF RFPAQPQAAE AAVDTSAAAD GDEDDLYK

Best Arabidopsis Sequence Match ( AT3G01610.1 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.