Factsheet for TraesCS6D01G326400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G376500.1	Wheat	golgi	100.0	100.0
TraesCSU01G080700.1	Wheat	cytosol	100.0	100.0
HORVU6Hr1G083150.1	Barley	cytosol	100.0	100.0
GSMUA_AchrUn_...	Banana	cytosol	96.95	97.18
Bra005023.1-P	Field mustard	cytosol	54.46	97.07
TraesCS7D01G157200.1	Wheat	cytosol	96.71	96.71
GSMUA_Achr8P16830_001	Banana	cytosol	96.24	96.47
KRH69005	Soybean	nucleus	95.77	95.77
PGSC0003DMT400023656	Potato	cytosol	96.01	95.56
CDY30665	Canola	cytosol	95.54	95.54
VIT_09s0002g00170.t01	Wine grape	cytosol	95.54	95.54
Solyc03g123730.2.1	Tomato	nucleus	95.77	95.33
CDY36602	Canola	cytosol	95.31	95.31
CDY24076	Canola	cytosol	95.31	95.31
Bra039688.1-P	Field mustard	cytosol	95.07	95.07
AT1G53750.1	Thale cress	cytosol	95.07	95.07
PGSC0003DMT400012446	Potato	cytosol	95.31	94.64
CDY25685	Canola	cytosol	94.6	94.6
CDY02494	Canola	cytosol	94.6	94.6
Bra030922.1-P	Field mustard	cytosol	94.6	94.6
CDX74842	Canola	cytosol	90.61	93.69
CDY20470	Canola	cytosol, plasma membrane	93.43	93.43
Bra040569.1-P	Field mustard	cytosol	93.66	92.15
CDY08201	Canola	cytosol	74.18	89.01
CDY30663	Canola	cytosol	76.29	75.23
AT1G53780.2	Thale cress	cytosol	81.46	55.97
TraesCS7D01G350300.1	Wheat	cytosol	46.01	46.34
TraesCS6D01G166700.1	Wheat	cytosol, golgi	45.31	46.17
TraesCS6D01G149500.1	Wheat	cytosol	37.79	44.72
TraesCS7D01G375500.1	Wheat	cytosol	38.73	41.25
TraesCS7D01G532000.1	Wheat	cytosol	37.56	40.2
TraesCS3D01G417000.1	Wheat	cytosol	39.44	38.71
TraesCS7D01G134800.1	Wheat	cytosol	38.73	38.46
TraesCS2D01G476000.1	Wheat	cytosol	36.85	37.65
TraesCS2D01G083900.1	Wheat	golgi	36.62	37.59
TraesCS4D01G190600.1	Wheat	cytosol, golgi	38.5	36.44
TraesCS2D01G087900.1	Wheat	cytosol, golgi	38.26	36.3
TraesCS2D01G471200.1	Wheat	cytosol	36.85	34.66
TraesCS1D01G340100.1	Wheat	cytosol	20.66	34.38
TraesCS1D01G194500.1	Wheat	cytosol	21.13	33.96
TraesCS3D01G153300.1	Wheat	cytosol	17.61	33.48
TraesCS2D01G353100.1	Wheat	cytosol	28.4	21.3
TraesCS3D01G153800.1	Wheat	cytosol	29.58	18.53
TraesCS3D01G154000.1	Wheat	cytosol	33.1	17.89
TraesCS1D01G399100.1	Wheat	cytosol	32.39	17.49
TraesCS4D01G267800.1	Wheat	cytosol	33.1	17.34
TraesCS4D01G267600.2	Wheat	cytosol	33.1	17.24
TraesCS1D01G248000.1	Wheat	cytosol	31.92	17.24
TraesCS3D01G153900.1	Wheat	cytosol	31.46	17.01
TraesCS1D01G253100.1	Wheat	cytosol	31.46	16.75
TraesCS1D01G223800.1	Wheat	cytosol	31.46	16.75
TraesCS5D01G081900.1	Wheat	mitochondrion	28.87	16.55
TraesCS3D01G443600.1	Wheat	mitochondrion	28.17	16.04
TraesCS6D01G360700.1	Wheat	cytosol	27.46	15.9
TraesCS7D01G023600.1	Wheat	mitochondrion	29.11	15.8
TraesCS4D01G105500.2	Wheat	cytosol, plastid	29.34	12.43
TraesCS1D01G073600.1	Wheat	cytosol, plastid	29.11	12.34
TraesCS2D01G458300.3	Wheat	mitochondrion	26.76	12.22
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	23.47	9.17
TraesCS5D01G306600.2	Wheat	mitochondrion	22.3	8.68

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.1	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF60	SMART:SM00382
SUPFAM:SSF52540	TIGRFAMs:TIGR01242	EnsemblPlantsGene:TraesCS6D01G326400	EnsemblPlants:TraesCS6D01G326400.1	TIGR:cd00009	SEG:seg

Description

No Description!

Coordinates

chr6D:+:431460082..431464081

Molecular Weight (calculated)

47641.8 Da

IEP (calculated)

5.702

GRAVY (calculated)

-0.405

Length

426 amino acids

Sequence
(BLAST)

001: MAPEPEDDIM AEKNPRPLDE DDIALLKTYG LGPYSTSIKT AEKEIKELAK RINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIINPNTD
101: DAKYMINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIIFFDEV DAIGGARFDD GAGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LEGRTQIFKI HTRTMNCERD IRFELLARLC PNATGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDSVNKVI KGYQKFSATP KYMVYN

Best Arabidopsis Sequence Match ( AT1G53750.1 )
(BLAST)

001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN

Arabidopsis Description

RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.