Factsheet for GSMUA_AchrUn_randomP12540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	41.41	98.88
GSMUA_Achr8P16830_001	Banana	cytosol	98.59	98.59
EES01223	Sorghum	cytosol	98.35	98.12
EES07646	Sorghum	cytosol	98.12	97.89
KRH69005	Soybean	nucleus	98.12	97.89
Os06t0192600-01	Rice	cytosol, nucleus, plasma membrane, plastid	98.12	97.89
Zm00001d018309_P003	Maize	cytosol	98.12	97.89
VIT_09s0002g00170.t01	Wine grape	cytosol	97.88	97.65
PGSC0003DMT400023656	Potato	cytosol	98.12	97.43
Solyc03g123730.2.1	Tomato	nucleus	97.88	97.2
TraesCS7D01G157200.1	Wheat	cytosol	97.18	96.95
TraesCS7B01G060900.1	Wheat	golgi	97.18	96.95
TraesCS7A01G156800.1	Wheat	cytosol	97.18	96.95
TraesCS6D01G326400.1	Wheat	cytosol	97.18	96.95
TraesCS6B01G376500.1	Wheat	golgi	97.18	96.95
TraesCSU01G080700.1	Wheat	cytosol	97.18	96.95
HORVU6Hr1G083150.1	Barley	cytosol	97.18	96.95
PGSC0003DMT400012446	Potato	cytosol	97.65	96.74
HORVU7Hr1G032070.1	Barley	cytosol	96.94	92.79
Zm00001d052078_P003	Maize	cytosol	98.12	91.25
GSMUA_Achr6P12250_001	Banana	cytosol	33.88	47.52
GSMUA_Achr7P09950_001	Banana	cytosol	44.24	46.65
GSMUA_Achr10P...	Banana	cytosol	45.18	45.71
GSMUA_Achr11P...	Banana	cytosol	33.88	44.17
GSMUA_AchrUn_...	Banana	cytosol	39.29	41.65
GSMUA_Achr4P03720_001	Banana	cytosol	38.35	40.95
GSMUA_Achr5P04520_001	Banana	cytosol	38.59	40.49
GSMUA_Achr7P17620_001	Banana	cytosol	39.06	40.49
GSMUA_Achr9P13230_001	Banana	cytosol	38.35	40.25
GSMUA_Achr3P04570_001	Banana	cytosol	40.0	40.19
GSMUA_Achr4P05850_001	Banana	cytosol	37.88	37.97
GSMUA_Achr4P05840_001	Banana	cytosol	37.41	37.77
GSMUA_Achr7P21960_001	Banana	cytosol	36.71	32.23
GSMUA_Achr5P13290_001	Banana	cytosol	12.71	24.55
GSMUA_Achr6P11080_001	Banana	plastid	30.35	21.54
GSMUA_Achr3P00250_001	Banana	cytosol	9.88	21.43
GSMUA_Achr6P29120_001	Banana	cytosol	29.41	20.83
GSMUA_Achr7P04540_001	Banana	cytosol	33.18	17.85
GSMUA_Achr4P26800_001	Banana	cytosol	32.94	17.31
GSMUA_Achr5P15500_001	Banana	cytosol, plasma membrane	32.94	17.31
GSMUA_Achr9P23550_001	Banana	mitochondrion	31.76	16.75
GSMUA_Achr4P03560_001	Banana	mitochondrion	29.18	15.86
GSMUA_Achr3P00260_001	Banana	cytosol	16.24	14.14
GSMUA_Achr6P20030_001	Banana	cytosol	27.29	12.01
GSMUA_Achr11P...	Banana	cytosol	23.76	9.01

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.1	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
EnsemblPlantsGene:GSMUA_AchrUn_randomG12540_001	EnsemblPlants:GSMUA_AchrUn_randomP12540_001	EnsemblPlants:GSMUA_AchrUn_randomT12540_001	UniProt:M0U8L3	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF60	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242
UniParc:UPI00029615DD	SEG:seg	:	:	:	:

Description

26S protease regulatory subunit 7 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12540_001]

Coordinates

chrchrUn_random:+:59965762..59976032

Molecular Weight (calculated)

47495.6 Da

IEP (calculated)

6.065

GRAVY (calculated)

-0.405

Length

425 amino acids

Sequence
(BLAST)

001: MAPEPEDEIS EKNPRPLDED DIALLKTYGL GPYSTSIKKA EKEIKELAKK VNDLCGIKES DTGLAAPSQW DLVSDKQMMQ EEQPLQVARC TKIINPNTED
101: AKYVINVKQI AKFVVGLGDK VSPTDIEEGM RVGVDRNKYQ IQIPLPPKID PSVTMMTVEE KPDVTYNDVG GCKEQIEKMR EVVELPMLHP EKFVKLGIDP
201: PKGVLCYGPP GTGKTLLARA VANRTDACFI RVIGSELVQK YVGEGARMVR ELFQMARSKK ACIVFFDEVD AIGGARFDDG VGGDNEVQRT MLEIVNQLDG
301: FDARGNIKVL MATNRPDTLD PALLRPGRLD RKVEFGLPDL EGRTQIFKIH TRTMNCERDI RFELLARLCP NSTGADIRSV CTEAGMYAIR ARRKTVTEKD
401: FLDAVNKVIK GYQKFSATPK YMVYN

Best Arabidopsis Sequence Match ( AT1G53750.1 )
(BLAST)

001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN

Arabidopsis Description

RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.