Factsheet for GSMUA_Achr10P27140_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09950_001	Banana	cytosol	94.05	98.01
EES06492	Sorghum	cytosol	94.05	93.6
Zm00001d053616_P002	Maize	cytosol	94.05	93.6
Os02t0205300-01	Rice	cytosol	94.29	93.4
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	93.81	93.36
TraesCS6D01G166700.1	Wheat	cytosol, golgi	92.14	92.58
TraesCS6B01G207100.1	Wheat	cytosol	92.14	92.58
TraesCS6A01G177600.1	Wheat	cytosol	92.14	92.58
TraesCS7D01G350300.1	Wheat	cytosol	92.14	91.49
TraesCS7B01G254400.1	Wheat	cytosol	92.14	91.49
TraesCS7A01G372600.1	Wheat	cytosol	92.14	91.49
HORVU7Hr1G084550.2	Barley	cytosol	92.14	91.49
Os06t0600100-01	Rice	plasma membrane	87.14	86.52
HORVU6Hr1G036990.7	Barley	cytosol	92.14	83.77
GSMUA_AchrUn_...	Banana	cytosol	23.1	54.49
GSMUA_Achr6P12250_001	Banana	cytosol	34.76	48.18
GSMUA_Achr11P...	Banana	cytosol	35.95	46.32
GSMUA_Achr8P16830_001	Banana	cytosol	45.71	45.18
GSMUA_AchrUn_...	Banana	cytosol	45.71	45.18
GSMUA_AchrUn_...	Banana	cytosol	41.43	43.39
GSMUA_Achr4P03720_001	Banana	cytosol	40.71	42.96
GSMUA_Achr7P17620_001	Banana	cytosol	41.43	42.44
GSMUA_Achr9P13230_001	Banana	cytosol	40.24	41.73
GSMUA_Achr5P04520_001	Banana	cytosol	40.24	41.73
GSMUA_Achr4P05850_001	Banana	cytosol	41.19	40.8
GSMUA_Achr4P05840_001	Banana	cytosol	40.71	40.62
GSMUA_Achr3P04570_001	Banana	cytosol	40.0	39.72
GSMUA_Achr7P21960_001	Banana	cytosol	37.86	32.85
GSMUA_Achr5P13290_001	Banana	cytosol	12.86	24.55
GSMUA_Achr3P00250_001	Banana	cytosol	9.76	20.92
GSMUA_Achr6P11080_001	Banana	plastid	29.76	20.87
GSMUA_Achr6P29120_001	Banana	cytosol	25.71	18.0
GSMUA_Achr7P04540_001	Banana	cytosol	29.29	15.57
GSMUA_Achr4P26800_001	Banana	cytosol	29.76	15.45
GSMUA_Achr5P15500_001	Banana	cytosol, plasma membrane	29.76	15.45
GSMUA_Achr9P23550_001	Banana	mitochondrion	29.29	15.26
GSMUA_Achr4P03560_001	Banana	mitochondrion	27.86	14.96
GSMUA_Achr3P00260_001	Banana	cytosol	14.52	12.5
GSMUA_Achr6P20030_001	Banana	cytosol	25.24	10.97
GSMUA_Achr11P...	Banana	cytosol	28.1	10.53
Os06t0600301-00	Rice	plasma membrane	1.67	3.1

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.6	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	InterPro:AAA+_ATPase
InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
EnsemblPlantsGene:GSMUA_Achr10G27140_001	EnsemblPlants:GSMUA_Achr10P27140_001	EnsemblPlants:GSMUA_Achr10T27140_001	UniProt:M0RLT8	InterPro:P-loop_NTPase	PFAM:PF00004
ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF57	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242
UniParc:UPI000295A550	SEG:seg	:	:	:	:

Description

26S protease regulatory subunit 8 homolog A [Source:GMGC_GENE;Acc:GSMUA_Achr10G27140_001]

Coordinates

chr10:-:30381039..30385399

Molecular Weight (calculated)

47249.8 Da

IEP (calculated)

9.196

GRAVY (calculated)

-0.371

Length

420 amino acids

Sequence
(BLAST)

001: MATVAVEKKH PAEAEGEMCA PAARVRGGGG EGLRQYYLQH IHDHQLQIRQ KSNNLQRLEA QRNDLNSRVR MLREELQLLQ EPGSYVGEVV KVMGKSKVLV
101: KVHPEGKYVV DLDKSIDITK LTPSTRVALR NDSYVLHLIL PSKVDPLVNL MKVEKVPDST YDMIGGLDQQ IKEIKEVIEL PIKHPELFES LGIAQPKGVL
201: LYGPPGTGKT LLARAVAHHT DCTFIRVSGS ELVQKYIGEG SRMVRELFVM AREHAPSIIF MDEIDSIGSA RMESGTGNGD SEVQRTMLEL LNQLDGFEAS
301: NKIKVLMATN RIDILDQALL RPGRIDRKIE FPNPNEESRF DILKIHSRKM NLMRGIDLKK IAEKMNGASG AELKAVCTEA GMFALRERRV HVTQEDFEMA
401: VAKVMKKETE KNMSLRKLWK

Best Arabidopsis Sequence Match ( AT5G19990.1 )
(BLAST)

001: MAAVGVDSRR PETAMEETCN VKGAAAKQGE GLKQYYLQHI HELQRQLRQK TNNLNRLEAQ RNELNSRVRM LREELQLLQE PGSYVGEVVK VMGKNKVLVK
101: VHPEGKYVVD IDKSIDITKI TPSTRVALRN DSYVLHLVLP SKVDPLVNLM KVEKVPDSTY DMIGGLDQQI KEIKEVIELP IKHPELFESL GIAQPKGVLL
201: YGPPGTGKTL LARAVAHHTD CTFIRVSGSE LVQKYIGEGS RMVRELFVMA REHAPSIIFM DEIDSIGSAR MESGSGNGDS EVQRTMLELL NQLDGFEASN
301: KIKVLMATNR IDILDQALLR PGRIDRKIEF PNPNEESRFD ILKIHSRKMN LMRGIDLKKI AEKMNGASGA ELKAVCTEAG MFALRERRVH VTQEDFEMAV
401: AKVMKKDTEK NMSLRKLWK

Arabidopsis Description

RPT6A26S proteasome regulatory subunit 8 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.