Factsheet for Os02t0205300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053616_P002	Maize	cytosol	98.58	99.05
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	98.35	98.82
TraesCS6A01G177600.1	Wheat	cytosol	96.46	97.85
TraesCS6B01G207100.1	Wheat	cytosol	96.46	97.85
TraesCS6D01G166700.1	Wheat	cytosol, golgi	96.46	97.85
GSMUA_Achr10P...	Banana	cytosol	93.4	94.29
VIT_04s0008g04690.t01	Wine grape	cytosol	92.69	93.57
VIT_09s0002g05800.t01	Wine grape	cytosol	91.75	93.29
AT5G19990.1	Thale cress	cytosol	91.75	92.84
CDY35832	Canola	cytosol	91.75	92.84
CDX70903	Canola	cytosol	91.04	92.79
Bra002279.1-P	Field mustard	cytosol	91.27	92.36
Solyc05g018590.2.1	Tomato	nucleus	90.57	92.09
Solyc05g018570.2.1	Tomato	cytosol, extracellular, nucleus, plastid	90.57	92.09
Bra006529.1-P	Field mustard	cytosol	90.57	91.65
KRH44668	Soybean	cytosol, mitochondrion, nucleus	89.86	91.15
AT5G20000.1	Thale cress	cytosol	89.86	90.93
KRH46990	Soybean	nucleus	89.39	90.67
Os06t0600100-01	Rice	plasma membrane	88.92	89.13
HORVU6Hr1G036990.7	Barley	cytosol	96.46	88.53
PGSC0003DMT400038718	Potato	cytosol	80.66	78.98
CDX88865	Canola	cytosol, extracellular	86.79	58.51
Os02t0784700-00	Rice	cytosol	24.29	54.79
CDY42324	Canola	cytosol, extracellular	90.8	53.7
CDY44958	Canola	cytosol, plasma membrane	91.04	53.54
Bra020079.1-P	Field mustard	cytosol	90.8	53.4
Os06t0192600-01	Rice	cytosol, nucleus, plasma membrane, plastid	45.05	44.84
Os02t0199900-01	Rice	nucleus, plasma membrane	39.86	42.25
Os06t0607800-01	Rice	nucleus	39.86	42.14
Os03t0298400-01	Rice	plasma membrane	42.22	39.78
Os04t0284600-01	Rice	cytosol	33.49	39.78
Os07t0691800-01	Rice	cytosol, nucleus, plasma membrane, plastid	41.98	39.73
Os06t0173100-01	Rice	cytosol, nucleus, plasma membrane	39.62	39.16
Os02t0803700-01	Rice	cytosol, nucleus, plastid	39.39	38.93
Os02t0325100-01	Rice	plastid	37.5	37.95
Os09t0560200-01	Rice	cytosol, mitochondrion	33.73	31.92
Os05t0376200-00	Rice	cytosol	25.71	27.88
Os10t0442600-01	Rice	cytosol, nucleus, plasma membrane, plastid	10.38	22.56
Os04t0498800-01	Rice	cytosol	28.77	21.11
Os06t0109400-01	Rice	cytosol	28.07	15.45
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	29.25	15.33
Os08t0413000-00	Rice	mitochondrion	28.3	13.27
Os04t0617600-01	Rice	cytosol	26.18	11.81
Os08t0556550-01	Rice	cytosol	2.59	10.28
Os06t0600301-00	Rice	plasma membrane	1.65	3.1
Os11t0220400-01	Rice	mitochondrion	0.94	0.85
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.24	0.14
Bra006530.1-P	Field mustard	cytosol, nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.6	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	EntrezGene:4328674
InterPro:AAA+_ATPase	EMBL:AB033537	EMBL:AK061762	EMBL:AK102286	EMBL:AK106217	InterPro:ATPase_AAA_CS
InterPro:ATPase_AAA_core	ProteinID:BAD16017.1	ProteinID:BAD38437.1	ProteinID:BAF08162.1	ProteinID:BAS77554.1	ncoils:Coil
ProteinID:EAZ22161.1	GO:GO:0000166	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006508	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0008540	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0017025	GO:GO:0019538	GO:GO:0030163	GO:GO:0030433
GO:GO:0031595	GO:GO:0031597	GO:GO:0036402	GO:GO:0045899	GO:GO:1901800	EnsemblPlantsGene:Os02g0205300
EnsemblPlants:Os02t0205300-01	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF57
UniProt:Q7GCH3	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI00000A1379	RefSeq:XP_015626915.1
SEG:seg	:	:	:	:	:

Description

19S REGULATORY PARTICLE ATPASE SUBUNIT 6Similar to TAT-binding protein homolog (Fragment). (Os02t0205300-01);Similar to TAT-binding protein homolog (Fragment). (Os02t0205300-02)

Coordinates

chr2:-:5918931..5923654

Molecular Weight (calculated)

47225.7 Da

IEP (calculated)

9.354

GRAVY (calculated)

-0.342

Length

424 amino acids

Sequence
(BLAST)

001: MATVAMDISK PPPAAGGDEA AAAKGRGGAG GGGGEGLRQY YLQHIHDLQL QIRQKTHNLN RLEAQRNDLN SRVRMLREEL QLLQEPGSYV GEVVKVMGKS
101: KVLVKVHPEG KYVVDIDKSI DITKITPSTR VALRNDSYML HLILPSKVDP LVNLMKVEKV PDSTYDMIGG LDQQIKEIKE VIELPIKHPE LFESLGIAQP
201: KGVLLYGPPG TGKTLLARAV AHHTDCTFIR VSGSELVQKY IGEGSRMVRE LFVMAREHAP SIIFMDEIDS IGSARMESGT GNGDSEVQRT MLELLNQLDG
301: FEASNKIKVL MATNRIDILD QALLRPGRID RKIEFPNPNE DSRFDILKIH SRKMNLMRGI DLKKIAEKMN GASGAELKAV CTEAGMFALR ERRVHVTQED
401: FEMAVAKVMK KDTEKNMSLR KLWK

Best Arabidopsis Sequence Match ( AT5G19990.1 )
(BLAST)

001: MAAVGVDSRR PETAMEETCN VKGAAAKQGE GLKQYYLQHI HELQRQLRQK TNNLNRLEAQ RNELNSRVRM LREELQLLQE PGSYVGEVVK VMGKNKVLVK
101: VHPEGKYVVD IDKSIDITKI TPSTRVALRN DSYVLHLVLP SKVDPLVNLM KVEKVPDSTY DMIGGLDQQI KEIKEVIELP IKHPELFESL GIAQPKGVLL
201: YGPPGTGKTL LARAVAHHTD CTFIRVSGSE LVQKYIGEGS RMVRELFVMA REHAPSIIFM DEIDSIGSAR MESGSGNGDS EVQRTMLELL NQLDGFEASN
301: KIKVLMATNR IDILDQALLR PGRIDRKIEF PNPNEESRFD ILKIHSRKMN LMRGIDLKKI AEKMNGASGA ELKAVCTEAG MFALRERRVH VTQEDFEMAV
401: AKVMKKDTEK NMSLRKLWK

Arabidopsis Description

RPT6A26S proteasome regulatory subunit 8 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9C5U3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.