Factsheet for Os08t0556550-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
EpiLoc:	peroxisome
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0442600-01	Rice	cytosol, nucleus, plasma membrane, plastid	22.43	12.31
Os02t0784700-00	Rice	cytosol	10.28	5.85
Os05t0376200-00	Rice	cytosol	15.89	4.35
Os02t0199900-01	Rice	nucleus, plasma membrane	15.89	4.25
Os06t0607800-01	Rice	nucleus	15.89	4.24
Os04t0284600-01	Rice	cytosol	13.08	3.92
Os02t0325100-01	Rice	plastid	14.95	3.82
Os04t0498800-01	Rice	cytosol	20.56	3.81
HORVU6Hr1G049800.1	Barley	cytosol	1.87	3.57
Os07t0691800-01	Rice	cytosol, nucleus, plasma membrane, plastid	14.02	3.35
Os03t0298400-01	Rice	plasma membrane	14.02	3.33
Os02t0803700-01	Rice	cytosol, nucleus, plastid	13.08	3.26
Os06t0173100-01	Rice	cytosol, nucleus, plasma membrane	13.08	3.26
Os03t0151800-02	Rice	cytosol, extracellular, nucleus, plasma membrane, plastid	22.43	2.97
Os09t0560200-01	Rice	cytosol, mitochondrion	11.21	2.68
Os06t0600100-01	Rice	plasma membrane	10.28	2.6
Os02t0205300-01	Rice	cytosol	10.28	2.59
Os06t0192600-01	Rice	cytosol, nucleus, plasma membrane, plastid	10.28	2.58
Os06t0109400-01	Rice	cytosol	17.76	2.47
Os08t0413000-00	Rice	mitochondrion	20.56	2.43
Os04t0617600-01	Rice	cytosol	19.63	2.23
CDY18139	Canola	extracellular, vacuole	1.87	0.66
Os06t0600301-00	Rice	plasma membrane	0.93	0.44
CDY69655	Canola	cytosol, nucleus	0.93	0.44
Os08t0556400-01	Rice	endoplasmic reticulum, golgi, plasma membrane	0.0	0.0
HORVU3Hr1G029660.1	Barley	cytosol, peroxisome	0.0	0.0
Os11t0220400-01	Rice	mitochondrion	0.0	0.0
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.8.60	MapMan:35.1	UniProt:A0A0P0XIR9	ProteinID:BAT06653.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0005778	GO:GO:0006625	GO:GO:0006810	GO:GO:0007031
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
GO:GO:0042623	EnsemblPlantsGene:Os08g0556550	EnsemblPlants:Os08t0556550-01	PANTHER:PTHR23077	PANTHER:PTHR23077:SF12	InterPro:Pex1
UniParc:UPI000393BE47	:	:	:	:	:

Description

Hypothetical conserved gene. (Os08t0556550-01)

Coordinates

chr8:+:27855280..27856246

Molecular Weight (calculated)

11475.5 Da

IEP (calculated)

7.362

GRAVY (calculated)

-0.337

Length

107 amino acids

Sequence
(BLAST)

001: VSLASDASLE EVASLTEGFT GADLAAILRD AKLAAVHKVL EDRNNGISDT QPCISKELLI STAREARPST SAEQKMQYDM DFGQFVSSRK SVSTKARESK
101: GKKVTLA

Best Arabidopsis Sequence Match ( AT5G08470.3 )
(BLAST)

0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KTGMWFSKFK IPSPGHILIY GPPGSGKTIL
0601: ARAAAKYFEE QKDLLAHVIL VSCSTLALEK VQHIHHVLSS VIAEGLEHAP SVIILDDLDS IISSSSDTEG TQASVGVTML TKFLTDVIDD YGEYRNSSCG
0701: IGPLAFVASV QSLEQIPQTL SSSGRFDFHV QLAAPATSER GAILKHEIQK RLLDCSEDIL LNLAAKCEGY DAYDLEILVD RAVHAAIGRH LPLESNISKY
0801: NLVKEDFTRA MHDFVPVAMR DITKSASEGG RLGWEDVGGV TDIKNAIKEM IELPSKFPKI FAKSPLRLRS NVLLYGPPGC GKTHIVGAAA AACSLRFISV
0901: KGPELLNKYI GASEQAVRDI FSKAAAAAPC ILFFDEFDSI APKRGHDNTG VTDRVVNQFL TELDGVEVLT GVFVFAATSR PDLLDPALLR PGRLDRLLLC
1001: DFPSPPERLE ILTVLSRKLL MADDIDLEPI ALMTEGFSGA DLQALLSDAQ LAAVHEYLNR EDKPETGTTP IITDPLLKSI ASKTKPSVSE TEKQKLYDIY
1101: SQFLDSRKSS REAKGKRATL A

Arabidopsis Description

PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.