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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • endoplasmic reticulum 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P13290_001 Banana cytosol 67.35 60.0
GSMUA_AchrUn_... Banana cytosol 20.92 23.03
GSMUA_Achr7P04540_001 Banana cytosol 87.24 21.65
GSMUA_Achr5P15500_001 Banana cytosol, plasma membrane 87.76 21.26
GSMUA_Achr4P26800_001 Banana cytosol 87.24 21.14
GSMUA_Achr9P23550_001 Banana mitochondrion 85.2 20.72
TraesCS3A01G144500.1 Wheat cytosol 53.57 19.7
TraesCS3B01G171200.1 Wheat cytosol 75.0 18.65
TraesCS3A01G145100.1 Wheat cytosol 75.0 18.63
TraesCS3B01G172000.1 Wheat cytosol 74.49 18.62
EER95525 Sorghum cytosol 73.98 18.59
KXG40206 Sorghum cytosol 73.98 18.54
TraesCS3D01G154000.1 Wheat cytosol 74.49 18.53
TraesCS1D01G399100.1 Wheat cytosol 73.47 18.25
TraesCS1B01G259200.1 Wheat cytosol 73.47 18.25
HORVU0Hr1G006340.1 Barley cytosol 72.96 18.15
TraesCS3B01G154400.1 Wheat cytosol 72.96 18.15
TraesCS3D01G153900.1 Wheat cytosol 72.96 18.15
TraesCS1B01G419200.1 Wheat cytosol 72.96 18.12
TraesCS3B01G172100.1 Wheat cytosol 72.96 18.1
TraesCS1D01G248000.1 Wheat cytosol 72.45 18.0
HORVU3Hr1G029450.1 Barley cytosol 72.96 17.7
HORVU3Hr1G029440.1 Barley cytosol 72.96 17.57
TraesCS3A01G145000.1 Wheat cytosol 62.24 17.53
TraesCS3B01G171300.1 Wheat cytosol 53.57 14.4
GSMUA_Achr6P12250_001 Banana cytosol 21.94 14.19
TraesCS6D01G360700.1 Wheat cytosol 50.0 13.32
GSMUA_Achr11P... Banana cytosol 21.94 13.19
TraesCS3B01G171400.1 Wheat cytosol 47.45 12.79
TraesCS3D01G153800.1 Wheat cytosol 38.27 11.03
GSMUA_AchrUn_... Banana cytosol 22.45 10.97
GSMUA_Achr7P17620_001 Banana cytosol 22.45 10.73
GSMUA_Achr4P03720_001 Banana cytosol 20.92 10.3
GSMUA_Achr7P09950_001 Banana cytosol 20.92 10.17
GSMUA_Achr9P13230_001 Banana cytosol 20.92 10.12
GSMUA_Achr5P04520_001 Banana cytosol 20.92 10.12
GSMUA_AchrUn_... Banana cytosol 21.43 9.88
GSMUA_Achr8P16830_001 Banana cytosol 21.43 9.88
GSMUA_Achr10P... Banana cytosol 20.92 9.76
GSMUA_Achr4P05840_001 Banana cytosol 20.92 9.74
GSMUA_Achr4P05850_001 Banana cytosol 20.92 9.67
GSMUA_Achr6P29120_001 Banana cytosol 28.06 9.17
GSMUA_Achr3P04570_001 Banana cytosol 19.39 8.98
GSMUA_Achr7P21960_001 Banana cytosol 21.94 8.88
GSMUA_Achr6P11080_001 Banana plastid 21.94 7.18
GSMUA_Achr4P03560_001 Banana mitochondrion 27.04 6.78
GSMUA_Achr11P... Banana cytosol 28.06 4.91
GSMUA_Achr6P20030_001 Banana cytosol 23.98 4.87
GSMUA_Achr3P00260_001 Banana cytosol 5.61 2.25
TraesCS5B01G323100.1 Wheat cytosol 2.04 0.69
TraesCS1A01G248500.1 Wheat cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr3P00250_001EnsemblPlants:GSMUA_Achr3T00250_001EnsemblPlantsGene:GSMUA_Achr3G00250_001Gene3D:1.10.8.60Gene3D:3.40.50.300GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524InterPro:ATPase_AAA_coreInterPro:P-loop_NTPasePANTHER:PTHR23077
PANTHER:PTHR23077:SF122PFAM:PF00004SEG:segSUPFAM:SSF52540UniParc:UPI000294F8B5UniProt:M0SAJ3
MapMan:35.1:::::
Description
Cell division cycle protein 48 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr3G00250_001]
Coordinates
chr3:-:247885..248724
Molecular Weight (calculated)
21938.6 Da
IEP (calculated)
4.600
GRAVY (calculated)
-0.598
Length
196 amino acids
Sequence
(BLAST)
001: MDGMNAKKTV FIIGATNRPD IIDPASLRPG RLDQLIYIPL PDEASRYQIF KACLRKSPVA KDVDLMALAN YTQGFSGADI TEIFQRTCKC AIRENIEKDI
101: EREWRRSENP EAMDEDDADE VAEIKAVHFE ESMKFARRSV SDADIRKYQA FAQTLQQSRG FGSEFRFPGR AEAGTAGTDH PFATSGAGAD DDDLYN
Best Arabidopsis Sequence Match ( AT3G09840.1 )
(BLAST)
001: MSTPAESSDS KSKKDFSTAI LERKKSPNRL VVDEAINDDN SVVSLHPATM EKLQLFRGDT ILIKGKKRKD TVCIALADET CEEPKIRMNK VVRSNLRVRL
101: GDVISVHQCP DVKYGKRVHI LPVDDTVEGV TGNLFDAYLK PYFLEAYRPV RKGDLFLVRG GMRSVEFKVI ETDPAEYCVV APDTEIFCEG EPVKREDEER
201: LDDVGYDDVG GVRKQMAQIR ELVELPLRHP QLFKSIGVKP PKGILLYGPP GSGKTLIARA VANETGAFFF CINGPEIMSK LAGESESNLR KAFEEAEKNA
301: PSIIFIDEID SIAPKREKTN GEVERRIVSQ LLTLMDGLKS RAHVIVMGAT NRPNSIDPAL RRFGRFDREI DIGVPDEIGR LEVLRIHTKN MKLAEDVDLE
401: RISKDTHGYV GADLAALCTE AALQCIREKM DVIDLEDDSI DAEILNSMAV TNEHFHTALG NSNPSALRET VVEVPNVSWN DIGGLENVKR ELQETVQYPV
501: EHPEKFEKFG MSPSKGVLFY GPPGCGKTLL AKAIANECQA NFISVKGPEL LTMWFGESEA NVREIFDKAR QSAPCVLFFD ELDSIATQRG GGSGGDGGGA
601: ADRVLNQLLT EMDGMNAKKT VFIIGATNRP DIIDSALLRP GRLDQLIYIP LPDEDSRLNI FKAALRKSPI AKDVDIGALA KYTQGFSGAD ITEICQRACK
701: YAIRENIEKD IEKEKRRSEN PEAMEEDGVD EVSEIKAAHF EESMKYARRS VSDADIRKYQ AFAQTLQQSR GFGSEFRFEN SAGSGATTGV ADPFATSAAA
801: AGDDDDLYN
Arabidopsis Description
CDC48AAT3G09840 protein [Source:UniProtKB/TrEMBL;Acc:B9DI55]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.