Factsheet for Zm00001d052078_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018309_P003	Maize	cytosol	93.22	100.0
EES07646	Sorghum	cytosol	93.22	100.0
Bra005023.1-P	Field mustard	cytosol	51.64	98.74
GSMUA_AchrUn_...	Banana	cytosol	91.25	98.12
GSMUA_Achr8P16830_001	Banana	cytosol	91.25	98.12
Solyc03g123730.2.1	Tomato	nucleus	91.25	97.43
PGSC0003DMT400023656	Potato	cytosol	91.25	97.43
VIT_09s0002g00170.t01	Wine grape	cytosol	90.59	97.18
KRH69005	Soybean	nucleus	90.59	97.18
CDY24076	Canola	cytosol	90.59	97.18
CDY36602	Canola	cytosol	90.59	97.18
AT1G53750.1	Thale cress	cytosol	90.37	96.95
CDY30665	Canola	cytosol	90.37	96.95
Bra039688.1-P	Field mustard	cytosol	90.37	96.95
PGSC0003DMT400012446	Potato	cytosol	90.81	96.74
CDY25685	Canola	cytosol	89.5	96.01
CDY02494	Canola	cytosol	89.5	96.01
Bra030922.1-P	Field mustard	cytosol	89.5	96.01
CDX74842	Canola	cytosol	86.0	95.39
CDY20470	Canola	cytosol, plasma membrane	88.62	95.07
Bra040569.1-P	Field mustard	cytosol	88.62	93.53
CDY08201	Canola	cytosol	70.68	90.99
CDY30663	Canola	cytosol	72.65	76.85
AT1G53780.2	Thale cress	cytosol	77.68	57.26
Zm00001d045163_P001	Maize	mitochondrion	19.04	49.43
Zm00001d016439_P003	Maize	cytosol, extracellular, plasma membrane	41.79	45.26
Zm00001d053616_P002	Maize	cytosol	41.79	45.26
Zm00001d053649_P002	Maize	cytosol, mitochondrion	35.89	41.0
Zm00001d015788_P001	Maize	plasma membrane	35.89	41.0
Zm00001d046539_P002	Maize	cytosol, mitochondrion	35.45	40.7
Zm00001d037481_P003	Maize	cytosol, extracellular, plasma membrane	36.98	39.3
Zm00001d028801_P001	Maize	cytosol, extracellular	36.54	37.44
Zm00001d022573_P001	Maize	cytosol, extracellular, plasma membrane	36.54	37.36
Zm00001d018409_P007	Maize	cytosol	35.89	36.61
Zm00001d007215_P001	Maize	cytosol	36.54	35.99
Zm00001d050616_P002	Maize	plastid	34.14	35.94
Zm00001d032117_P001	Maize	cytosol	19.69	28.12
Zm00001d015886_P002	Maize	cytosol	26.91	22.69
Zm00001d009592_P001	Maize	cytosol	12.47	21.76
Zm00001d025776_P002	Maize	cytosol	26.91	21.65
Zm00001d027707_P001	Maize	cytosol, plasma membrane	30.85	17.47
Zm00001d048409_P001	Maize	cytosol	30.63	17.41
Zm00001d032859_P006	Maize	plasma membrane	30.85	17.41
Zm00001d014124_P001	Maize	cytosol, plasma membrane	30.85	17.39
Zm00001d035913_P002	Maize	cytosol, mitochondrion	27.57	17.19
Zm00001d050303_P001	Maize	cytosol	29.54	17.09
Zm00001d045566_P001	Maize	cytosol, mitochondrion	27.79	16.54
Zm00001d022096_P002	Maize	mitochondrion	26.26	15.85
Zm00001d049140_P006	Maize	cytosol, plastid	28.88	13.13
Zm00001d002462_P010	Maize	mitochondrion	24.95	10.72
Zm00001d049974_P004	Maize	peroxisome	21.44	8.79
Zm00001d002717_P001	Maize	mitochondrion	7.0	7.84
Zm00001d053999_P001	Maize	cytosol	7.0	7.79
Zm00001d027244_P001	Maize	cytosol	4.81	6.01
Zm00001d033491_P001	Maize	cytosol, plasma membrane, plastid	1.09	1.98

Protein Annotations

Gene3D:1.10.8.60	EntrezGene:100272769	EntrezGene:100274064	MapMan:19.2.6.2.1.1	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like
Gene3D:3.40.50.300	UniProt:A0A1D6QCY8	InterPro:AAA+_ATPase	ProteinID:AQK56070.1	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674	PANTHER:PTHR23073	PANTHER:PTHR23073:SF60	SMART:SM00382
SUPFAM:SSF52540	TIGRFAMs:TIGR01242	UniParc:UPI0008435D3A	EnsemblPlantsGene:Zm00001d052078	EnsemblPlants:Zm00001d052078_P003	EnsemblPlants:Zm00001d052078_T003
SEG:seg	:	:	:	:	:

Description

26S protease regulatory subunit 7 homolog A

Coordinates

chr4:+:178759836..178764070

Molecular Weight (calculated)

51281.3 Da

IEP (calculated)

6.341

GRAVY (calculated)

-0.313

Length

457 amino acids

Sequence
(BLAST)

001: MAPEPEDDIM NEKNPRPLDE DDIALLKTYG LGPYSTSIKK VEKEIKEMAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTD
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGYATLYF QFKLSLFSIS ILSPSFLLQH CDAFIVDRNK YQIQIPLPPK IDPSVTMMTV EEKPDVTYND
201: VGGCKEQIEK MREVVELPML HPEKFVKLGI DPPKGVLCYG PPGTGKTLLA RAVANRTDAC FIRVIGSELV QKYVGEGARM VRELFQMARS KKACIVFFDE
301: VDAIGGARFD DGVGGDNEVQ RTMLEIVNQL DGFDARGNIK VLMATNRPDT LDPALLRPGR LDRKVEFGLP DLEGRTQIFK IHTRTMNCER DIRFELLARL
401: CPNSTGADIR SVCTEAGMYA IRARRKTVTE KDFLDAVNKV IKGYQKFSAT PKYMVYN

Best Arabidopsis Sequence Match ( AT1G53750.1 )
(BLAST)

001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN

Arabidopsis Description

RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.