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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20470 Canola cytosol, plasma membrane 98.3 95.07
CDY30665 Canola cytosol 97.09 93.9
AT1G53750.1 Thale cress cytosol 96.84 93.66
CDY24076 Canola cytosol 96.84 93.66
CDY36602 Canola cytosol 96.84 93.66
CDY02494 Canola cytosol 96.6 93.43
CDY25685 Canola cytosol 96.36 93.19
Zm00001d018309_P003 Maize cytosol 95.39 92.25
EES01223 Sorghum cytosol 95.39 92.25
EES07646 Sorghum cytosol 95.39 92.25
PGSC0003DMT400023656 Potato cytosol 95.63 92.06
TraesCS7D01G157200.1 Wheat cytosol 94.66 91.55
TraesCS7B01G060900.1 Wheat golgi 94.66 91.55
TraesCS7A01G156800.1 Wheat cytosol 94.66 91.55
PGSC0003DMT400012446 Potato cytosol 95.15 91.38
Solyc06g063140.2.1 Tomato cytosol, extracellular, nucleus, plastid 95.15 91.38
HORVU6Hr1G083150.1 Barley cytosol 93.69 90.61
TraesCS6B01G376500.1 Wheat golgi 93.69 90.61
TraesCS6D01G326400.1 Wheat cytosol 93.69 90.61
TraesCSU01G080700.1 Wheat cytosol 93.69 90.61
CDY08201 Canola cytosol 75.49 87.61
HORVU7Hr1G032070.1 Barley cytosol 94.17 87.39
Zm00001d052078_P003 Maize cytosol 95.39 86.0
KRH06953 Soybean cytosol 49.76 75.93
VIT_11s0016g00230.t01 Wine grape cytosol 77.67 75.29
CDY30663 Canola cytosol 76.46 72.92
CDY20370 Canola cytosol 29.61 45.35
CDX70903 Canola cytosol 45.39 44.95
CDY35832 Canola cytosol 45.15 44.39
CDY39032 Canola cytosol 26.21 43.03
CDY22373 Canola cytosol 40.05 41.35
CDX71534 Canola cytosol 40.05 41.35
CDY25226 Canola cytosol 39.81 41.1
CDY02428 Canola cytosol, extracellular 39.56 40.85
CDY18782 Canola cytosol 39.56 38.44
CDY18801 Canola cytosol 39.56 38.44
CDX74142 Canola cytosol 39.56 38.44
CDY05176 Canola cytosol 39.56 38.44
CDY40714 Canola cytosol 39.56 38.44
CDY27761 Canola cytosol 39.56 38.44
CDX88666 Canola cytosol 37.14 37.87
CDY32995 Canola cytosol, extracellular 37.14 37.87
CDY32714 Canola cytosol 37.14 37.87
CDY02806 Canola cytosol 37.14 37.87
CDY43865 Canola cytosol 37.14 37.87
CDY58566 Canola cytosol 37.14 37.87
CDY06847 Canola cytosol 39.81 37.02
CDY35245 Canola cytosol 39.56 36.79
CDX97472 Canola cytosol 39.56 36.63
CDY14224 Canola cytosol 39.56 36.63
CDX92914 Canola cytosol, extracellular 39.32 36.57
CDY39033 Canola cytosol 34.95 35.47
CDY25624 Canola cytosol 20.87 34.26
CDY59958 Canola cytosol 28.88 32.69
CDY20371 Canola cytosol, plastid 34.22 32.05
CDX88865 Canola cytosol, extracellular 44.66 29.25
CDY42324 Canola cytosol, extracellular 45.63 26.22
CDY44958 Canola cytosol, plasma membrane 45.15 25.8
CDY04161 Canola cytosol 26.94 18.41
CDY11249 Canola cytosol 33.01 17.04
CDY41581 Canola cytosol 33.01 16.83
CDY54618 Canola cytosol 33.01 16.83
CDX73996 Canola cytosol 33.01 16.81
CDY07941 Canola cytosol 33.01 16.81
CDY41316 Canola cytosol, extracellular 33.01 16.79
CDY22207 Canola cytosol 33.01 16.79
CDY13308 Canola cytosol 33.01 16.79
CDX74308 Canola mitochondrion 28.64 16.71
CDX80862 Canola cytosol, plastid 32.77 16.69
CDX84794 Canola cytosol 28.4 15.75
CDY23949 Canola cytosol 27.67 15.72
CDX67563 Canola cytosol 32.77 15.36
CDX91939 Canola cytosol, mitochondrion 28.88 15.32
CDY33111 Canola endoplasmic reticulum, plasma membrane, vacuole 26.46 15.22
CDX78154 Canola cytosol 27.43 15.19
CDX73571 Canola cytosol 26.94 14.94
CDY45794 Canola nucleus 28.16 14.55
CDX89923 Canola cytosol 25.97 14.01
CDX72118 Canola plastid 30.58 13.35
CDX89698 Canola endoplasmic reticulum 22.33 13.24
CDY32490 Canola mitochondrion 27.91 12.41
CDY56774 Canola plastid 30.58 12.38
CDY37450 Canola mitochondrion 27.43 12.22
CDY02982 Canola cytosol 27.67 9.67
CDX69950 Canola cytosol 25.0 9.43
CDY62119 Canola cytosol 24.76 9.34
CDY18139 Canola extracellular, vacuole 3.64 4.95
CDY69655 Canola cytosol, nucleus 0.24 0.44
Protein Annotations
Gene3D:1.10.8.60MapMan:19.2.6.2.1.1Gene3D:2.40.50.140InterPro:26S_Psome_P45-likeGene3D:3.40.50.300GO:A0A078CDA5
InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreEnsemblPlants:CDX74842ProteinID:CDX74842ProteinID:CDX74842.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0016787GO:GO:0019538GO:GO:0030163EnsemblPlantsGene:GSBRNA2T00116823001InterPro:P-loop_NTPasePFAM:PF00004
ScanProsite:PS00674PANTHER:PTHR23073PANTHER:PTHR23073:SF60SMART:SM00382SUPFAM:SSF52540TIGRFAMs:TIGR01242
UniParc:UPI0004EE5D57:::::
Description
BnaA05g05880D
Coordinates
chrLK031802:-:932584..935056
Molecular Weight (calculated)
46202.2 Da
IEP (calculated)
7.603
GRAVY (calculated)
-0.377
Length
412 amino acids
Sequence
(BLAST)
001: MVREIEDNIE DKKNPRPLDE DDIALLKTYG LAPYSAPDKK VGKEIKEIAK RINDLCGIKE SDKQMMQEEQ PLQVARCTKI ISPNTEDAKY VINVKQIAKF
101: VVGLGDKVSP TDIEEGMRVG VDRNKYQIQI PLPPKIDPSV TVMTVEEKPD VTYNDVGGCK EQIEKMREVV ELPMLHPEKF VKLGIDPPKG VLCYGPPGTG
201: KTLLARAVAN RTDACFIRVI GSELVQKYVG EGARMVRELF QMARSKKACI VFFDEVDAIG GARFDDGVGG DNEVQRTMLE IVNQLDGFDA RGNIKVLMAT
301: NRPDTLDPAL LRPGLLDRKV EFGLPDLESR TQIFKIHTRT MNCERDIRFE LLARLCPNST GADIRSVCTE AGIYAIRARR KTVTEKDFLD AVNKVIKGYQ
401: KFSATPKYMV YN
Best Arabidopsis Sequence Match ( AT1G53750.1 )
(BLAST)
001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Arabidopsis Description
RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.