CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20370	Canola	cytosol	59.61	89.96
CDY20371	Canola	cytosol, plastid	94.83	87.5
CDY39032	Canola	cytosol	48.77	78.88
TraesCS6D01G149500.1	Wheat	cytosol	54.93	61.94
Bra008198.1-P	Field mustard	cytosol	95.57	61.78
Zm00001d046539_P002	Maize	cytosol, mitochondrion	59.85	61.06
Zm00001d053649_P002	Maize	cytosol, mitochondrion	59.11	60.0
EES06471	Sorghum	cytosol	59.11	60.0
Zm00001d015788_P001	Maize	plasma membrane	59.11	60.0
GSMUA_AchrUn_...	Banana	cytosol	59.11	59.85
CDY25226	Canola	cytosol	58.62	59.65
CDY02428	Canola	cytosol, extracellular	58.62	59.65
EER88627	Sorghum	cytosol	58.37	59.55
Os02t0199900-01	Rice	nucleus, plasma membrane	58.62	59.5
TraesCS6A01G162700.2	Wheat	cytosol, golgi	58.62	59.5
CDX71534	Canola	cytosol	58.37	59.4
CDY22373	Canola	cytosol	58.37	59.4
VIT_18s0001g13090.t01	Wine grape	cytosol	58.13	59.3
TraesCS6B01G188500.1	Wheat	cytosol	58.37	59.25
GSMUA_Achr4P03720_001	Banana	cytosol	57.88	59.05
TraesCS7D01G375500.1	Wheat	cytosol	58.13	59.0
TraesCS7B01G280400.1	Wheat	cytosol, unclear	58.13	59.0
TraesCS7A01G378600.1	Wheat	cytosol	57.88	58.75
Os06t0607800-01	Rice	nucleus	57.88	58.6
GSMUA_Achr7P17620_001	Banana	cytosol	59.11	58.54
HORVU6Hr1G032570.5	Barley	cytosol	56.65	56.23
TraesCS7A01G545700.1	Wheat	cytosol	54.93	56.03
TraesCS7D01G532000.1	Wheat	cytosol	54.43	55.53
TraesCS7B01G468900.1	Wheat	cytosol	54.19	55.28
HORVU7Hr1G119300.13	Barley	cytosol	53.94	54.48
HORVU7Hr1G090380.3	Barley	cytosol	58.13	54.13
CDX70903	Canola	cytosol	40.89	39.9
CDY35832	Canola	cytosol	40.64	39.38
CDY25624	Canola	cytosol	22.91	37.05
CDY06847	Canola	cytosol	39.16	35.89
CDY35245	Canola	cytosol	38.92	35.67
CDX92914	Canola	cytosol, extracellular	38.92	35.67
CDY14224	Canola	cytosol	38.92	35.51
CDX97472	Canola	cytosol	38.92	35.51
CDX74842	Canola	cytosol	35.47	34.95
CDY43865	Canola	cytosol	34.73	34.9
CDY58566	Canola	cytosol	34.73	34.9
CDY32995	Canola	cytosol, extracellular	34.73	34.9
CDY32714	Canola	cytosol	34.73	34.9
CDX88666	Canola	cytosol	34.73	34.9
CDY02806	Canola	cytosol	34.73	34.9
CDY25685	Canola	cytosol	36.21	34.51
CDY24076	Canola	cytosol	36.21	34.51
CDY30665	Canola	cytosol	36.21	34.51
CDY02494	Canola	cytosol	36.21	34.51
CDY20470	Canola	cytosol, plasma membrane	36.21	34.51
CDY36602	Canola	cytosol	36.21	34.51
CDY08201	Canola	cytosol	29.56	33.8
CDY27761	Canola	cytosol	34.24	32.78
CDX74142	Canola	cytosol	34.24	32.78
CDY05176	Canola	cytosol	34.24	32.78
CDY18801	Canola	cytosol	34.24	32.78
CDY18782	Canola	cytosol	34.24	32.78
CDY40714	Canola	cytosol	34.24	32.78
CDY59958	Canola	cytosol	29.31	32.69
CDY30663	Canola	cytosol	32.27	30.32
CDX88865	Canola	cytosol, extracellular	40.64	26.23
CDY44958	Canola	cytosol, plasma membrane	40.89	23.02
CDY42324	Canola	cytosol, extracellular	40.64	23.01
CDY04161	Canola	cytosol	26.11	17.58
CDX74308	Canola	mitochondrion	28.08	16.15
CDY23949	Canola	cytosol	27.83	15.59
CDX84794	Canola	cytosol	28.33	15.48
CDY11249	Canola	cytosol	29.8	15.16
CDY41581	Canola	cytosol	30.05	15.1
CDY54618	Canola	cytosol	30.05	15.1
CDX73996	Canola	cytosol	30.05	15.08
CDX80862	Canola	cytosol, plastid	30.05	15.08
CDY07941	Canola	cytosol	30.05	15.08
CDY22207	Canola	cytosol	30.05	15.06
CDY41316	Canola	cytosol, extracellular	30.05	15.06
CDY33111	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.35	14.94
CDY13308	Canola	cytosol	29.8	14.94
CDY45794	Canola	nucleus	29.06	14.81
CDX91939	Canola	cytosol, mitochondrion	28.33	14.8
CDX89923	Canola	cytosol	26.6	14.14
CDX67563	Canola	cytosol	29.8	13.77
CDX89698	Canola	endoplasmic reticulum	22.66	13.24
CDX73571	Canola	cytosol	23.4	12.79
CDX78154	Canola	cytosol	23.4	12.77
CDY37450	Canola	mitochondrion	28.08	12.32
CDY32490	Canola	mitochondrion	28.08	12.3
CDX72118	Canola	plastid	28.57	12.29
CDY56774	Canola	plastid	29.06	11.59
CDX69950	Canola	cytosol	26.85	9.98
CDY62119	Canola	cytosol	26.35	9.8
CDY02982	Canola	cytosol	27.09	9.33
CDY18139	Canola	extracellular, vacuole	3.69	4.95
CDY69655	Canola	cytosol, nucleus	0.74	1.32

Protein Annotations

Gene3D:1.10.8.60	MapMan:19.2.6.2.1.4	Gene3D:2.40.50.140	InterPro:26S_Psome_P45-like	Gene3D:3.40.50.300	GO:A0A078HQJ6
UniProt:A0A078HQJ6	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	EnsemblPlants:CDY39033	ProteinID:CDY39033
ProteinID:CDY39033.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0030163
GO:GO:0036402	GO:GO:1901800	EnsemblPlantsGene:GSBRNA2T00067167001	InterPro:P-loop_NTPase	PFAM:PF00004	ScanProsite:PS00674
InterPro:PSMC6	PANTHER:PTHR23073	PANTHER:PTHR23073:SF59	SMART:SM00382	SUPFAM:SSF52540	TIGRFAMs:TIGR01242
UniParc:UPI0004EDDC17	:	:	:	:	:

Description

BnaA02g17220DBnaA02g17220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQJ6]

Coordinates

chrLK032439:+:43632..45465

Molecular Weight (calculated)

45528.3 Da

IEP (calculated)

8.782

GRAVY (calculated)

-0.267

Length

406 amino acids

Sequence
(BLAST)

001: MEDVDEEIVR RINDDKVKRG IAIMRCKSKL LIRNINQERT KTVKENLEAL KLRLEETGDE LKYFTTTHAE LVGEVVQPLG KERFLVKVNE GVRYIVNRSS
101: LVAQSKLVSG TRVSLQRRTF TILRILPPEV NPLVQKMVYQ HDGGDVSYSD LGGLTHQLKD VRDWIERPLI DPDIFERVGV KPPKGVLLYG PPGTGKTFLA
201: KAIASNINST FLMVVSSSLV SKYVGESSLM VREMFKYARE HQPCIVFMDE IDAIGRRRSS YGEGDTSECG RVLIELLSQL DGFDELDKVK VIMATNRPDV
301: LDPALLRPGR IDKKIEFSLP NEDSRMRILK IHASGITKQG AIDYEKVVKL SEGFSGADMR NICTEAGMLA LRAGHDYVVP NDFIKAVTKL GEAKKLESSA
401: HYSAGF

Best Arabidopsis Sequence Match ( AT5G43010.1 )
(BLAST)

001: MTDVDESVRR RTAAVSEYRK KLLQHKELES RVRTARENLR GAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDNLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMDILK IHAAGIAKHG EIDYEAIVKL AEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE

Arabidopsis Description

RPT4A26S proteasome regulatory subunit 10B homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9SEI3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.