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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020378.1-P Field mustard cytosol 99.75 99.75
CDY32714 Canola cytosol 99.75 99.75
CDY58566 Canola cytosol 99.01 99.01
CDX88666 Canola cytosol 99.01 99.01
CDY43865 Canola cytosol 98.76 98.76
CDY32995 Canola cytosol, extracellular 98.51 98.51
AT5G58290.1 Thale cress cytosol 97.52 96.57
HORVU2Hr1G107280.1 Barley cytosol 87.13 95.14
VIT_06s0004g08220.t01 Wine grape cytosol 95.05 91.87
KRG98107 Soybean cytosol 95.54 91.47
KRH30674 Soybean cytosol, nucleus 93.32 91.28
Solyc06g082660.2.1 Tomato cytosol, nucleus 93.32 91.06
KRH30673 Soybean cytosol, nucleus 95.3 91.02
Solyc06g082630.2.1 Tomato cytosol, plastid 93.07 90.82
PGSC0003DMT400053010 Potato cytosol 92.82 90.8
PGSC0003DMT400078301 Potato cytosol 92.57 90.34
HORVU3Hr1G067470.2 Barley cytosol 50.25 89.43
HORVU2Hr1G014000.1 Barley cytosol 90.1 88.78
TraesCS2A01G086400.1 Wheat cytosol 90.35 87.95
TraesCS2D01G083900.1 Wheat golgi 90.35 87.95
TraesCS2D01G476000.1 Wheat cytosol 90.59 87.77
TraesCS2B01G100400.1 Wheat cytosol, plastid 90.1 87.71
TraesCS2B01G499600.1 Wheat cytosol 90.35 87.53
Os02t0325100-01 Rice plastid 90.59 87.35
KXG39890 Sorghum cytosol 90.59 87.14
TraesCS2A01G475900.1 Wheat cytosol 90.59 85.71
Zm00001d050616_P002 Maize plastid 90.84 84.56
EER91182 Sorghum cytosol 83.91 80.71
GSMUA_Achr7P21960_001 Banana cytosol 93.07 77.69
Zm00001d015886_P002 Maize cytosol 77.97 58.12
CDY06847 Canola cytosol 46.78 42.66
CDX92914 Canola cytosol, extracellular 46.53 42.44
CDY35245 Canola cytosol 46.53 42.44
CDX97472 Canola cytosol 46.29 42.02
CDY14224 Canola cytosol 46.29 42.02
CDY20370 Canola cytosol 27.23 40.89
CDY39032 Canola cytosol 25.0 40.24
CDY25226 Canola cytosol 38.86 39.35
CDY59958 Canola cytosol 35.4 39.29
CDY02428 Canola cytosol, extracellular 38.61 39.1
CDX71534 Canola cytosol 38.61 39.1
CDY22373 Canola cytosol 38.61 39.1
CDX70903 Canola cytosol 40.1 38.94
CDY35832 Canola cytosol 39.85 38.42
CDY18782 Canola cytosol 39.11 37.26
CDX74142 Canola cytosol 39.11 37.26
CDY27761 Canola cytosol 39.11 37.26
CDY18801 Canola cytosol 39.11 37.26
CDY05176 Canola cytosol 39.11 37.26
CDY40714 Canola cytosol 39.11 37.26
CDX74842 Canola cytosol 37.87 37.14
CDY02494 Canola cytosol 38.61 36.62
CDY36602 Canola cytosol 38.61 36.62
CDY30665 Canola cytosol 38.61 36.62
CDY25685 Canola cytosol 38.61 36.62
CDY24076 Canola cytosol 38.61 36.62
CDY20470 Canola cytosol, plasma membrane 38.12 36.15
CDY39033 Canola cytosol 34.9 34.73
CDY08201 Canola cytosol 30.45 34.65
CDY30663 Canola cytosol 36.39 34.03
CDY25624 Canola cytosol 20.05 32.27
CDY20371 Canola cytosol, plastid 34.16 31.36
CDX88865 Canola cytosol, extracellular 39.6 25.44
CDY44958 Canola cytosol, plasma membrane 39.85 22.33
CDY42324 Canola cytosol, extracellular 39.6 22.32
CDY04161 Canola cytosol 27.97 18.74
CDY33111 Canola endoplasmic reticulum, plasma membrane, vacuole 27.72 15.64
CDX74308 Canola mitochondrion 27.23 15.58
CDY11249 Canola cytosol 30.45 15.41
CDY13308 Canola cytosol 30.69 15.31
CDY54618 Canola cytosol 30.45 15.22
CDY41581 Canola cytosol 30.45 15.22
CDX73996 Canola cytosol 30.45 15.2
CDX80862 Canola cytosol, plastid 30.45 15.2
CDY07941 Canola cytosol 30.45 15.2
CDY22207 Canola cytosol 30.45 15.19
CDY41316 Canola cytosol, extracellular 30.45 15.19
CDY23949 Canola cytosol 26.98 15.03
CDX84794 Canola cytosol 26.49 14.4
CDX91939 Canola cytosol, mitochondrion 27.48 14.29
CDY45794 Canola nucleus 27.97 14.18
CDX67563 Canola cytosol 30.69 14.11
CDX73571 Canola cytosol 24.75 13.46
CDX89923 Canola cytosol 25.25 13.35
CDX78154 Canola cytosol 24.5 13.31
CDX89698 Canola endoplasmic reticulum 20.54 11.94
CDY37450 Canola mitochondrion 26.73 11.68
CDX72118 Canola plastid 27.23 11.65
CDY32490 Canola mitochondrion 26.73 11.65
CDY56774 Canola plastid 27.23 10.81
CDY62119 Canola cytosol 27.23 10.07
CDX69950 Canola cytosol 27.23 10.07
CDY02982 Canola cytosol 28.22 9.67
CDY18139 Canola extracellular, vacuole 1.98 2.64
CDY69655 Canola cytosol, nucleus 0.25 0.44
Protein Annotations
Gene3D:1.10.8.60MapMan:19.2.6.2.1.3Gene3D:2.40.50.140InterPro:26S_Psome_P45-likeGene3D:3.40.50.300GO:A0A078ENR1
InterPro:AAA+_ATPaseInterPro:ATPase_AAA_CSInterPro:ATPase_AAA_coreunigene:Bna.1288EnsemblPlants:CDY02806ProteinID:CDY02806
ProteinID:CDY02806.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0030163
GO:GO:0036402EnsemblPlantsGene:GSBRNA2T00114983001InterPro:P-loop_NTPasePFAM:PF00004ScanProsite:PS00674InterPro:PSMC4
PANTHER:PTHR23073PANTHER:PTHR23073:SF8SMART:SM00382SUPFAM:SSF52540TIGRFAMs:TIGR01242UniParc:UPI0004EBD0C9
Description
BnaC02g10830D
Coordinates
chrLK031937:+:543842..546222
Molecular Weight (calculated)
45475.5 Da
IEP (calculated)
5.151
GRAVY (calculated)
-0.406
Length
404 amino acids
Sequence
(BLAST)
001: MAAAMVLDPK PSPSLIDLST PDEEDPYSRL KSLERQLEFT DIQEEYVKDE QKNLKRELLR AQEEVKRIQS VPLVIGQFME MVDQNNGIVG STTGSNYYVR
101: ILSTINREDL KPSASVALHR HSNALVDVLP PEADSSISLL SQSEKPDVSY NDIGGCDIQK QEIREAVELP LTHHELYKQI GIDPPRGVLL YGPPGTGKTM
201: LAKAVANHTT AAFIRVVGSE FVQKYLGEGP RMVRDVFRLA KENAPAIIFI DEVDAIATAR FDAQTGADRE VQRILMELLN QMDGFDQTVN VKVIMATNRA
301: DTLDPALLRP GRLDRKIEFP LPDRRQKRLV FQVCTAKMNL SDEVDLEDYV SRPDKISAAE IAAICQEAGM HAVRKNRYVI LPKDFEKGYR SNVKKPDTDF
401: EFYK
Best Arabidopsis Sequence Match ( AT5G58290.1 )
(BLAST)
001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
Arabidopsis Description
RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.