Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88666 | Canola | cytosol | 97.3 | 98.27 |
| CDY58566 | Canola | cytosol | 97.06 | 98.02 |
| CDY43865 | Canola | cytosol | 96.81 | 97.77 |
| CDY32714 | Canola | cytosol | 96.81 | 97.77 |
| Bra020378.1-P | Field mustard | cytosol | 96.81 | 97.77 |
| Bra006775.1-P | Field mustard | cytosol | 93.63 | 97.7 |
| CDY02806 | Canola | cytosol | 96.57 | 97.52 |
| Bra002662.1-P | Field mustard | cytosol | 96.57 | 97.52 |
| CDY32995 | Canola | cytosol, extracellular | 96.32 | 97.28 |
| HORVU2Hr1G107280.1 | Barley | cytosol | 86.27 | 95.14 |
| VIT_06s0004g08220.t01 | Wine grape | cytosol | 94.12 | 91.87 |
| KRG98107 | Soybean | cytosol | 94.36 | 91.23 |
| Solyc06g082660.2.1 | Tomato | cytosol, nucleus | 92.4 | 91.06 |
| Solyc06g082630.2.1 | Tomato | cytosol, plastid | 92.4 | 91.06 |
| KRH30674 | Soybean | cytosol, nucleus | 92.16 | 91.04 |
| PGSC0003DMT400053010 | Potato | cytosol | 91.91 | 90.8 |
| KRH30673 | Soybean | cytosol, nucleus | 94.12 | 90.78 |
| PGSC0003DMT400078301 | Potato | cytosol | 91.91 | 90.58 |
| HORVU2Hr1G014000.1 | Barley | cytosol | 89.46 | 89.02 |
| HORVU3Hr1G067470.2 | Barley | cytosol | 49.51 | 88.99 |
| TraesCS2D01G476000.1 | Wheat | cytosol | 90.69 | 88.73 |
| TraesCS2B01G499600.1 | Wheat | cytosol | 90.44 | 88.49 |
| TraesCS2A01G086400.1 | Wheat | cytosol | 89.95 | 88.43 |
| TraesCS2D01G083900.1 | Wheat | golgi | 89.95 | 88.43 |
| TraesCS2B01G100400.1 | Wheat | cytosol, plastid | 89.71 | 88.19 |
| Os02t0325100-01 | Rice | plastid | 90.2 | 87.83 |
| KXG39890 | Sorghum | cytosol | 90.2 | 87.62 |
| TraesCS2A01G475900.1 | Wheat | cytosol | 90.69 | 86.65 |
| Zm00001d050616_P002 | Maize | plastid | 90.44 | 85.02 |
| EER91182 | Sorghum | cytosol | 83.09 | 80.71 |
| GSMUA_Achr7P21960_001 | Banana | cytosol | 92.65 | 78.1 |
| Zm00001d015886_P002 | Maize | cytosol | 77.7 | 58.49 |
| AT4G29040.1 | Thale cress | cytosol | 47.06 | 43.34 |
| AT2G20140.1 | Thale cress | cytosol | 46.81 | 43.12 |
| AT1G45000.1 | Thale cress | cytosol | 38.73 | 39.6 |
| AT5G43010.1 | Thale cress | cytosol | 37.99 | 38.85 |
| AT5G20000.1 | Thale cress | cytosol | 39.46 | 38.42 |
| AT5G19990.1 | Thale cress | cytosol | 39.46 | 38.42 |
| AT1G09100.1 | Thale cress | cytosol | 38.97 | 37.59 |
| AT3G05530.1 | Thale cress | cytosol | 38.73 | 37.26 |
| AT1G53750.1 | Thale cress | cytosol | 37.99 | 36.38 |
| AT1G53780.2 | Thale cress | cytosol | 38.73 | 25.48 |
| AT2G03670.1 | Thale cress | cytosol | 27.21 | 18.41 |
| AT3G53230.1 | Thale cress | cytosol | 30.64 | 15.34 |
| AT3G09840.1 | Thale cress | cytosol | 30.15 | 15.2 |
| AT5G03340.1 | Thale cress | cytosol | 29.9 | 15.06 |
| AT3G01610.2 | Thale cress | nucleus | 26.72 | 13.13 |
| AT1G03000.1 | Thale cress | mitochondrion | 26.96 | 11.69 |
| AT3G56690.1 | Thale cress | cytosol, plastid | 27.21 | 10.86 |
| AT5G08470.1 | Thale cress | cytosol | 27.7 | 10.0 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.3 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | EntrezGene:835941 |
| UniProt:A0A178UAH2 | InterPro:AAA+_ATPase | ProteinID:AED97029.1 | EMBL:AF123392 | ArrayExpress:AT5G58290 | EnsemblPlantsGene:AT5G58290 |
| RefSeq:AT5G58290 | TAIR:AT5G58290 | RefSeq:AT5G58290-TAIR-G | EnsemblPlants:AT5G58290.1 | TAIR:AT5G58290.1 | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | EMBL:AY070466 | ProteinID:BAA96920.1 | EMBL:BT020373 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0017025 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0030312 | GO:GO:0030433 | GO:GO:0031595 |
| GO:GO:0031597 | GO:GO:0036402 | GO:GO:0045899 | GO:GO:1901800 | RefSeq:NP_200637.1 | ProteinID:OAO90157.1 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00674 | InterPro:PSMC4 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF8 | UniProt:Q9SEI4 |
| Symbol:RPT3 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | UniParc:UPI0000132370 | : |
Description
RPT3RPT3 [Source:UniProtKB/TrEMBL;Acc:A0A178UAH2]
Coordinates
chr5:+:23569052..23571854
Molecular Weight (calculated)
45753.9 Da
IEP (calculated)
5.259
GRAVY (calculated)
-0.343
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAAVASMV LDPKASPALM DLSTADEEDL YGRLKSLERQ LEFTDIQEEY VKDEQKNLKR ELLRAQEEVK RIQSVPLVIG QFMEMVDQNN GIVGSTTGSN
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
101: YYVRILSTIN RELLKPSASV ALHRHSNALV DVLPPEADSS ISLLSQSEKP DVSYNDIGGC DIQKQEIREA VELPLTHHEL YKQIGIDPPR GVLLYGPPGT
201: GKTMLAKAVA NHTTAAFIRV VGSEFVQKYL GEGPRMVRDV FRLAKENAPA IIFIDEVDAI ATARFDAQTG ADREVQRILM ELLNQMDGFD QTVNVKVIMA
301: TNRADTLDPA LLRPGRLDRK IEFPLPDRRQ KRLVFQVCTS KMNLSDEVDL EDYVSRPDKI SAAEIAAICQ EAGMHAVRKN RYVILPKDFE KGYRANVKKP
401: DTDFEFYK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.