Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005023.1-P | Field mustard | cytosol | 47.45 | 85.77 |
| Os02t0784700-00 | Rice | cytosol | 35.88 | 82.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.33 | 80.9 |
| CDY24076 | Canola | cytosol | 77.78 | 78.87 |
| CDY30665 | Canola | cytosol | 77.78 | 78.87 |
| CDY36602 | Canola | cytosol | 77.78 | 78.87 |
| CDY25685 | Canola | cytosol | 77.08 | 78.17 |
| CDY02494 | Canola | cytosol | 77.08 | 78.17 |
| Zm00001d018309_P003 | Maize | cytosol | 76.85 | 77.93 |
| EES07646 | Sorghum | cytosol | 76.85 | 77.93 |
| EES01223 | Sorghum | cytosol | 76.62 | 77.7 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 76.39 | 77.46 |
| TraesCS7B01G060900.1 | Wheat | golgi | 76.39 | 77.46 |
| TraesCS7A01G156800.1 | Wheat | cytosol | 76.39 | 77.46 |
| PGSC0003DMT400023656 | Potato | cytosol | 76.62 | 77.34 |
| PGSC0003DMT400012446 | Potato | cytosol | 76.16 | 76.69 |
| CDY20470 | Canola | cytosol, plasma membrane | 75.46 | 76.53 |
| CDX74842 | Canola | cytosol | 72.92 | 76.46 |
| HORVU6Hr1G083150.1 | Barley | cytosol | 75.23 | 76.29 |
| TraesCS6B01G376500.1 | Wheat | golgi | 75.23 | 76.29 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 75.23 | 76.29 |
| TraesCSU01G080700.1 | Wheat | cytosol | 75.23 | 76.29 |
| CDY08201 | Canola | cytosol | 62.5 | 76.06 |
| HORVU7Hr1G032070.1 | Barley | cytosol | 76.16 | 74.1 |
| Zm00001d052078_P003 | Maize | cytosol | 76.85 | 72.65 |
| AT1G53780.2 | Thale cress | cytosol | 73.61 | 51.29 |
| CDY20370 | Canola | cytosol | 26.16 | 42.01 |
| CDY39032 | Canola | cytosol | 23.38 | 40.24 |
| CDX70903 | Canola | cytosol | 37.96 | 39.42 |
| CDY35832 | Canola | cytosol | 37.96 | 39.14 |
| CDY02428 | Canola | cytosol, extracellular | 34.03 | 36.84 |
| CDY25226 | Canola | cytosol | 34.03 | 36.84 |
| CDY22373 | Canola | cytosol | 34.03 | 36.84 |
| CDX71534 | Canola | cytosol | 34.03 | 36.84 |
| CDX88666 | Canola | cytosol | 34.03 | 36.39 |
| CDY43865 | Canola | cytosol | 34.03 | 36.39 |
| CDY32995 | Canola | cytosol, extracellular | 34.03 | 36.39 |
| CDY32714 | Canola | cytosol | 34.03 | 36.39 |
| CDY58566 | Canola | cytosol | 34.03 | 36.39 |
| CDY02806 | Canola | cytosol | 34.03 | 36.39 |
| CDY40714 | Canola | cytosol | 35.42 | 36.08 |
| CDY05176 | Canola | cytosol | 35.42 | 36.08 |
| CDY27761 | Canola | cytosol | 35.42 | 36.08 |
| CDX74142 | Canola | cytosol | 35.42 | 36.08 |
| CDY18801 | Canola | cytosol | 35.42 | 36.08 |
| CDY18782 | Canola | cytosol | 35.42 | 36.08 |
| CDY06847 | Canola | cytosol | 35.19 | 34.31 |
| CDX92914 | Canola | cytosol, extracellular | 34.95 | 34.09 |
| CDY35245 | Canola | cytosol | 34.95 | 34.09 |
| CDX97472 | Canola | cytosol | 34.95 | 33.93 |
| CDY14224 | Canola | cytosol | 34.95 | 33.93 |
| CDY25624 | Canola | cytosol | 19.44 | 33.47 |
| CDY39033 | Canola | cytosol | 30.32 | 32.27 |
| CDY20371 | Canola | cytosol, plastid | 30.32 | 29.77 |
| CDY59958 | Canola | cytosol | 25.0 | 29.67 |
| CDX88865 | Canola | cytosol, extracellular | 37.96 | 26.07 |
| CDY42324 | Canola | cytosol, extracellular | 38.43 | 23.15 |
| CDY44958 | Canola | cytosol, plasma membrane | 37.96 | 22.75 |
| CDY04161 | Canola | cytosol | 23.61 | 16.92 |
| CDX74308 | Canola | mitochondrion | 25.23 | 15.44 |
| CDY11249 | Canola | cytosol | 28.47 | 15.41 |
| CDY41581 | Canola | cytosol | 28.7 | 15.35 |
| CDY54618 | Canola | cytosol | 28.7 | 15.35 |
| CDY07941 | Canola | cytosol | 28.7 | 15.33 |
| CDX73996 | Canola | cytosol | 28.7 | 15.33 |
| CDY41316 | Canola | cytosol, extracellular | 28.7 | 15.31 |
| CDY22207 | Canola | cytosol | 28.7 | 15.31 |
| CDY13308 | Canola | cytosol | 28.47 | 15.19 |
| CDX80862 | Canola | cytosol, plastid | 28.24 | 15.08 |
| CDY23949 | Canola | cytosol | 24.31 | 14.48 |
| CDX84794 | Canola | cytosol | 24.77 | 14.4 |
| CDY33111 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.38 | 14.11 |
| CDX91939 | Canola | cytosol, mitochondrion | 25.23 | 14.03 |
| CDX67563 | Canola | cytosol | 28.24 | 13.88 |
| CDX78154 | Canola | cytosol | 23.15 | 13.44 |
| CDX89923 | Canola | cytosol | 23.61 | 13.35 |
| CDX73571 | Canola | cytosol | 22.69 | 13.19 |
| CDY45794 | Canola | nucleus | 24.31 | 13.17 |
| CDX72118 | Canola | plastid | 27.31 | 12.5 |
| CDX89698 | Canola | endoplasmic reticulum | 19.21 | 11.94 |
| CDY56774 | Canola | plastid | 27.31 | 11.59 |
| CDY32490 | Canola | mitochondrion | 24.77 | 11.54 |
| CDY37450 | Canola | mitochondrion | 24.54 | 11.46 |
| CDX69950 | Canola | cytosol | 22.22 | 8.79 |
| CDY62119 | Canola | cytosol | 21.99 | 8.7 |
| CDY02982 | Canola | cytosol | 23.15 | 8.48 |
| CDY18139 | Canola | extracellular, vacuole | 4.4 | 6.27 |
| CDY69655 | Canola | cytosol, nucleus | 0.23 | 0.44 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.1 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | GO:A0A078H1J2 |
| UniProt:A0A078H1J2 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | EnsemblPlants:CDY30663 | ProteinID:CDY30663 |
| ProteinID:CDY30663.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | EnsemblPlantsGene:GSBRNA2T00045983001 |
| InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | PANTHER:PTHR23073 | PANTHER:PTHR23073:SF60 | SMART:SM00382 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | TIGRFAMs:TIGR01242 | UniParc:UPI0004EE6FE6 | SEG:seg | : |
Description
BnaC06g10270DBnaC06g10270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1J2]
Coordinates
chrLK032257:-:233943..236389
Molecular Weight (calculated)
48096.3 Da
IEP (calculated)
8.468
GRAVY (calculated)
-0.334
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MASMGANQNA SQCLAWWLMR LIPVSTDEEG DSVSTGGSTD GEHELRVCLW NQKLKGPGPY SAAIKKVEKE VEDLAKKINY LCVKLFTFIS DTDTGLAPSS
101: QWDLASDKRM IKEEKPLHVA RCTSVISPNT PDAQYVISFK QRAKFAVGLG DNVSPTDIKQ GMRVGVDMKK YQIQIPLPPK IDHRVTMMTV EEKPDVTYND
201: VGGCKEQIEK IRAVVELPML HPEKFVKLGI DPPKGVLCYG PPGTGKTLLA RAVANRTDAC FIRVIGSELV QKYVGQGARM VRELFQMARS KKACIVFFDE
301: VDAIGGARFD DGVGGDNEVQ RTMLEIVNQL DGFDARGNIK VLMATNRPDT LDPALLRPGR LDRKVEFGLP DLESRTQIFK IQIHTRTMNC ERDIRFELLA
401: RLCPNSTRAD IRSVCTEAGM YAIRARRKKD GD
101: QWDLASDKRM IKEEKPLHVA RCTSVISPNT PDAQYVISFK QRAKFAVGLG DNVSPTDIKQ GMRVGVDMKK YQIQIPLPPK IDHRVTMMTV EEKPDVTYND
201: VGGCKEQIEK IRAVVELPML HPEKFVKLGI DPPKGVLCYG PPGTGKTLLA RAVANRTDAC FIRVIGSELV QKYVGQGARM VRELFQMARS KKACIVFFDE
301: VDAIGGARFD DGVGGDNEVQ RTMLEIVNQL DGFDARGNIK VLMATNRPDT LDPALLRPGR LDRKVEFGLP DLESRTQIFK IQIHTRTMNC ERDIRFELLA
401: RLCPNSTRAD IRSVCTEAGM YAIRARRKKD GD
001: MVRDIEDEIR DEKNPRPLDE DDIALLKTYG LGPYSAPIKK VEKEIKDLAK KINDLCGIKE SDTGLAPPSQ WDLVSDKQMM QEEQPLQVAR CTKIISPNTE
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
101: DAKYVINVKQ IAKFVVGLGD KVSPTDIEEG MRVGVDRNKY QIQIPLPPKI DPSVTMMTVE EKPDVTYNDV GGCKEQIEKM REVVELPMLH PEKFVKLGID
201: PPKGVLCYGP PGTGKTLLAR AVANRTDACF IRVIGSELVQ KYVGEGARMV RELFQMARSK KACIVFFDEV DAIGGARFDD GVGGDNEVQR TMLEIVNQLD
301: GFDARGNIKV LMATNRPDTL DPALLRPGRL DRKVEFGLPD LESRTQIFKI HTRTMNCERD IRFELLARLC PNSTGADIRS VCTEAGMYAI RARRKTVTEK
401: DFLDAVNKVI KGYQKFSATP KYMVYN
Arabidopsis Description
RPT1ARPT1A [Source:UniProtKB/TrEMBL;Acc:A0A178W3N8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.