Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G545700.1 | Wheat | cytosol | 96.48 | 96.48 |
| TraesCS7B01G468900.1 | Wheat | cytosol | 94.97 | 94.97 |
| HORVU7Hr1G119300.13 | Barley | cytosol | 90.45 | 89.55 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 71.86 | 79.44 |
| KRH51796 | Soybean | cytosol | 77.64 | 77.64 |
| GSMUA_Achr4P03720_001 | Banana | cytosol | 77.64 | 77.64 |
| KRH61120 | Soybean | endoplasmic reticulum | 77.64 | 77.64 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 77.89 | 77.5 |
| GSMUA_AchrUn_... | Banana | cytosol | 77.89 | 77.31 |
| Solyc01g109940.2.1 | Tomato | nucleus | 77.14 | 77.14 |
| PGSC0003DMT400079514 | Potato | cytosol | 77.14 | 77.14 |
| Bra033655.1-P | Field mustard | cytosol | 77.14 | 76.94 |
| CDX71534 | Canola | cytosol | 77.14 | 76.94 |
| CDY22373 | Canola | cytosol | 77.14 | 76.94 |
| VIT_18s0001g13090.t01 | Wine grape | cytosol | 76.88 | 76.88 |
| KRH05868 | Soybean | cytosol, nucleus | 76.88 | 76.69 |
| AT1G45000.1 | Thale cress | cytosol | 76.88 | 76.69 |
| VIT_03s0038g04350.t01 | Wine grape | cytosol | 76.63 | 76.44 |
| AT5G43010.1 | Thale cress | cytosol | 76.63 | 76.44 |
| CDY25226 | Canola | cytosol | 76.63 | 76.44 |
| CDY02428 | Canola | cytosol, extracellular | 76.63 | 76.44 |
| Bra035338.1-P | Field mustard | cytosol | 76.63 | 76.44 |
| KRH15139 | Soybean | cytosol, endoplasmic reticulum, nucleus | 76.63 | 76.44 |
| GSMUA_Achr7P17620_001 | Banana | cytosol | 77.64 | 75.37 |
| Solyc10g054040.1.1 | Tomato | cytosol, unclear | 72.36 | 72.18 |
| CDY20370 | Canola | cytosol | 41.46 | 61.34 |
| KRH51488 | Soybean | mitochondrion | 62.06 | 58.39 |
| CDY39032 | Canola | cytosol | 36.43 | 57.77 |
| CDY39033 | Canola | cytosol | 55.53 | 54.43 |
| KRH00031 | Soybean | plastid | 45.48 | 52.46 |
| CDY20371 | Canola | cytosol, plastid | 54.52 | 49.32 |
| TraesCS2D01G083900.1 | Wheat | golgi | 41.71 | 40.0 |
| TraesCS6D01G166700.1 | Wheat | cytosol, golgi | 41.96 | 39.95 |
| TraesCS7D01G350300.1 | Wheat | cytosol | 41.96 | 39.48 |
| TraesCS2D01G476000.1 | Wheat | cytosol | 41.21 | 39.33 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 40.2 | 37.56 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 39.45 | 36.85 |
| TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 40.45 | 35.86 |
| TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 40.45 | 35.78 |
| TraesCS3D01G417000.1 | Wheat | cytosol | 38.44 | 35.25 |
| Bra008198.1-P | Field mustard | cytosol | 55.28 | 35.03 |
| TraesCS7D01G134800.1 | Wheat | cytosol | 36.93 | 34.27 |
| TraesCS1D01G194500.1 | Wheat | cytosol | 21.86 | 32.83 |
| TraesCS3D01G153300.1 | Wheat | cytosol | 18.09 | 32.14 |
| TraesCS1D01G340100.1 | Wheat | cytosol | 20.6 | 32.03 |
| TraesCS2D01G471200.1 | Wheat | cytosol | 36.18 | 31.79 |
| TraesCS2D01G353100.1 | Wheat | cytosol | 28.89 | 20.25 |
| TraesCS3D01G153800.1 | Wheat | cytosol | 30.65 | 17.94 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 30.9 | 16.55 |
| TraesCS1D01G253100.1 | Wheat | cytosol | 33.17 | 16.5 |
| TraesCS4D01G267800.1 | Wheat | cytosol | 33.67 | 16.48 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 30.9 | 16.44 |
| TraesCS3D01G154000.1 | Wheat | cytosol | 32.41 | 16.37 |
| TraesCS1D01G223800.1 | Wheat | cytosol | 32.66 | 16.25 |
| TraesCS1D01G399100.1 | Wheat | cytosol | 32.16 | 16.22 |
| TraesCS1D01G248000.1 | Wheat | cytosol | 32.16 | 16.22 |
| TraesCS4D01G267600.2 | Wheat | cytosol | 33.17 | 16.14 |
| TraesCS3D01G153900.1 | Wheat | cytosol | 31.66 | 15.99 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 29.9 | 15.16 |
| TraesCS6D01G360700.1 | Wheat | cytosol | 27.89 | 15.08 |
| TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 30.15 | 11.94 |
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 30.15 | 11.93 |
| TraesCS2D01G458300.3 | Wheat | mitochondrion | 27.64 | 11.79 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 26.13 | 9.54 |
| TraesCS5D01G306600.2 | Wheat | mitochondrion | 24.12 | 8.78 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:19.2.6.2.1.4 | Gene3D:2.40.50.140 | InterPro:26S_Psome_P45-like | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase |
| InterPro:ATPase_AAA_CS | InterPro:ATPase_AAA_core | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 |
| GO:GO:0036402 | InterPro:P-loop_NTPase | PFAM:PF00004 | ScanProsite:PS00674 | InterPro:PSMC6 | PANTHER:PTHR23073 |
| PANTHER:PTHR23073:SF59 | SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01242 | EnsemblPlantsGene:TraesCS7D01G532000 | EnsemblPlants:TraesCS7D01G532000.1 |
| TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:626133540..626137086
Molecular Weight (calculated)
44150.7 Da
IEP (calculated)
9.091
GRAVY (calculated)
-0.252
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATADDARR AAAVAKYRAS LLAYRERQSL LSTGEENLKK ARKEREITDE HVKAFQCVGQ IVGEVLRPLG GDRFIVKARS GPRYLVNCRS KLNKENLKTG
101: TRVCLDPSTL TIMRMLPREV DPLVFNMVHE DPGNVSFSAV GGLSDQIREI RETIELPLMN PELFLRVGIT PPKGVLLYGP PGTGKTLLAR ALASNIDVNF
201: IKVVSSAVIG KYIGESARII REMFAYARNH EPCIIFMDEI DALGGRRFSE GTSADREIQR TLMELLNQLD GFDELGKVKI IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQARLEILKI HAAGMAKHGE INYEAAAKLA EGFNAADLRN ICTEAGMAAI RAERDYAINE DFMKGVRKLT ELKKLESSAN YKADFGRG
101: TRVCLDPSTL TIMRMLPREV DPLVFNMVHE DPGNVSFSAV GGLSDQIREI RETIELPLMN PELFLRVGIT PPKGVLLYGP PGTGKTLLAR ALASNIDVNF
201: IKVVSSAVIG KYIGESARII REMFAYARNH EPCIIFMDEI DALGGRRFSE GTSADREIQR TLMELLNQLD GFDELGKVKI IMATNRPDVL DPALLRPGRL
301: DRKIEIPLPN EQARLEILKI HAAGMAKHGE INYEAAAKLA EGFNAADLRN ICTEAGMAAI RAERDYAINE DFMKGVRKLT ELKKLESSAN YKADFGRG
001: MSDGDDAARR RTAAVTDYRK KLLHHKELES RVRTARENLR AAKKEFNKTE DDLKSLQSVG QIIGEVLRPL DNERLIVKAS SGPRYVVGCR SKVDKEKLTS
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
101: GTRVVLDMTT LTIMRALPRE VDPVVYNMLH EDPGNISYSA VGGLGDQIRE LRESIELPLM NPELFLRVGI KPPKGVLLYG PPGTGKTLLA RAIASNIDAN
201: FLKVVSSAII DKYIGESARL IREMFNYARE HQPCIIFMDE IDAIGGRRFS EGTSADREIQ RTLMELLNQL DGFDQLGKVK MIMATNRPDV LDPALLRPGR
301: LDRKIEIPLP NEQSRMEILK IHASGIAKHG EIDYEAIVKL GEGFNGADLR NICTEAGMFA IRAERDYVIH EDFMKAVRKL SEAKKLESSS HYNADFGKE
Arabidopsis Description
RPT4B26S protease regulatory subunit S10B homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAK9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.