Factsheet for TraesCS5D01G081900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G443600.1	Wheat	mitochondrion	87.48	86.9
EER87717	Sorghum	cytosol	72.68	69.68
Zm00001d035913_P002	Maize	cytosol, mitochondrion	68.51	69.44
Zm00001d045566_P001	Maize	cytosol, mitochondrion	71.33	69.01
TraesCS7D01G023600.1	Wheat	mitochondrion	71.74	67.9
Os06t0109400-01	Rice	cytosol	70.12	67.66
Zm00001d009592_P001	Maize	cytosol	23.15	65.65
Zm00001d022096_P002	Maize	mitochondrion	64.74	63.54
CDY25624	Canola	cytosol	20.46	60.56
GSMUA_Achr4P03560_001	Banana	mitochondrion	61.51	58.44
CDX74308	Canola	mitochondrion	48.59	51.13
KRH44049	Soybean	nucleus	54.1	50.82
VIT_01s0010g02600.t01	Wine grape	cytosol	55.59	50.06
Solyc01g068330.2.1	Tomato	nucleus	54.78	49.57
PGSC0003DMT400046254	Potato	cytosol	54.51	49.27
PGSC0003DMT400015455	Potato	mitochondrion	50.2	48.89
CDX91939	Canola	cytosol, mitochondrion	49.8	47.62
CDX84794	Canola	cytosol	46.7	46.7
Bra022833.1-P	Field mustard	cytosol	46.3	46.3
CDY23949	Canola	cytosol	44.82	45.93
AT3G01610.2	Thale cress	nucleus	50.47	45.18
Bra000999.1-P	Field mustard	cytosol, mitochondrion	50.07	44.66
CDY45794	Canola	nucleus	47.11	43.91
CDX89698	Canola	endoplasmic reticulum	40.11	42.88
TraesCS3D01G153300.1	Wheat	cytosol	12.38	41.07
TraesCS1D01G340100.1	Wheat	cytosol	13.86	40.23
TraesCS1D01G194500.1	Wheat	cytosol	14.27	40.0
KRH10420	Soybean	mitochondrion	26.11	39.19
TraesCS2D01G353100.1	Wheat	cytosol	29.07	38.03
TraesCS3D01G153800.1	Wheat	cytosol	31.63	34.56
TraesCS6D01G149500.1	Wheat	cytosol	16.15	33.33
TraesCS3D01G154000.1	Wheat	cytosol	35.13	33.12
TraesCS1D01G399100.1	Wheat	cytosol	34.59	32.57
TraesCS1D01G248000.1	Wheat	cytosol	34.32	32.32
TraesCS6D01G360700.1	Wheat	cytosol	31.36	31.66
TraesCS1D01G253100.1	Wheat	cytosol	34.05	31.62
TraesCS4D01G267800.1	Wheat	cytosol	34.32	31.37
TraesCS3D01G153900.1	Wheat	cytosol	33.24	31.35
TraesCS1D01G223800.1	Wheat	cytosol	33.65	31.25
TraesCS4D01G267600.2	Wheat	cytosol	34.32	31.17
TraesCS7D01G532000.1	Wheat	cytosol	16.55	30.9
TraesCS7D01G375500.1	Wheat	cytosol	16.42	30.5
TraesCS7D01G157200.1	Wheat	cytosol	16.96	29.58
TraesCS2D01G476000.1	Wheat	cytosol	16.42	29.26
TraesCS6D01G326400.1	Wheat	cytosol	16.55	28.87
TraesCS7D01G350300.1	Wheat	cytosol	16.42	28.84
TraesCS2D01G083900.1	Wheat	golgi	16.02	28.67
TraesCS6D01G166700.1	Wheat	cytosol, golgi	15.88	28.23
TraesCS3D01G417000.1	Wheat	cytosol	15.48	26.5
TraesCS2D01G471200.1	Wheat	cytosol	16.15	26.49
TraesCS2D01G087900.1	Wheat	cytosol, golgi	15.88	26.28
TraesCS4D01G190600.1	Wheat	cytosol, golgi	15.88	26.22
TraesCS7D01G134800.1	Wheat	cytosol	15.07	26.11
TraesCS1D01G073600.1	Wheat	cytosol, plastid	29.74	21.99
TraesCS4D01G105500.2	Wheat	cytosol, plastid	29.61	21.87
TraesCS2D01G458300.3	Wheat	mitochondrion	24.36	19.4
TraesCS5D01G306600.2	Wheat	mitochondrion	22.48	15.27
TraesCS7D01G277100.1	Wheat	cytosol, peroxisome, plastid	21.27	14.5

Protein Annotations

EnsemblPlants:TraesCS5D01G081900.1	EnsemblPlantsGene:TraesCS5D01G081900	Gene3D:1.10.8.60	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005524	InterPro:AAA+_ATPase	InterPro:ATPase_AAA_CS	InterPro:ATPase_AAA_core	InterPro:P-loop_NTPase
PANTHER:PTHR23077	PANTHER:PTHR23077:SF55	PFAM:PF00004	ScanProsite:PS00674	SEG:seg	SMART:SM00382
SUPFAM:SSF52540	TIGR:cd00009	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5D:-:82318532..82324619

Molecular Weight (calculated)

82089.2 Da

IEP (calculated)

8.237

GRAVY (calculated)

-0.368

Length

743 amino acids

Sequence
(BLAST)

001: MAKRPRRSYS LESRVRRVIL SDAGLAVPGS SADDVARAIR SRHREYQRYK LELFASVVRR AISSLPPAGD ACSDSASPPS RRCRSHDTTS SSTTLSPPSP
101: AFDVTKSLLR SSYSSQKSKR DPDANQQLEM EVTAEKVMMP DAEGGHSGGK GVMFADLGGM ESVIEKLMLE VVVPLCQPEL PLHLGVRPVT GILLHGPPGC
201: GKTTLAHAIA NETGVPFYKI SATEVVSGVS GASEENIRTL FSKAYRTAPS IVFIDEIDAI ASKRENMQRE MERRVVTQLM TCMDEFHQNF RSYATDDMDD
301: SQSYEKKKPG YVIVIGATNR PDAVDQALRR PGRFDREISL GVPDENARKQ ILERLAQKLR LPPEGQFNLL KIAKATPGFV GADLKALVDT AGSVAIKRIV
401: YARKDKCLKE GNNKQDYWRH PWDRHELQQL SITMDDFEEA ITEIVQPSMR REGFSSVPDV TWACVGGLDS LKKELDRSIV QCIKYPEYYK KFGVNMQAGV
501: LLFGPPGCGK TLIAKAVAHD SGANFIHIKG PEVLNRYVGE SESDIRKIFT RARINSPCIL FFDEVDALTT KRGKEGAWVV ERLLNQLLIE LDGADQREGV
601: YVIGATNRID VIDDALLRPG RLGQKYFVPL PSANERHSIL KALTHSQKKP VSCTVDLDAL ARREECNNLT GADLASLVNE AAKVALEESL KLLENGALSI
701: SSSCSVPSIE LSHFEQALSK IKPSVSEQQR KHYEALSQKY SAN

Best Arabidopsis Sequence Match ( AT3G01610.2 )
(BLAST)

001: MGRRGRGGGG GMGGGINRRY LSQVMDTCGK DLSTAEDIVD DLRSRYGNFA RLTRQVLLLN VRQVLNVRNN KRVKDEDEDD NIGDEEGSAS QRKKQRRVDE
101: KEEKLQRAEQ SHLRKRNMER SVSSSPSSSS SSEDSGDVST SEDAVYGEKL SPPRFDLIND SLRDNYAKLN SSSKKPIGSP AEKNVEVETV SNKGRSKLAT
201: MGARKEAKVS LSLSGATGNG DLEVEGTKGP TFKDFGGIKK ILDELEMNVL FPILNPEPFK KIGVKPPSGI LFHGPPGCGK TKLANAIANE AGVPFYKISA
301: TEVISGVSGA SEENIRELFS KAYRTAPSIV FIDEIDAIGS KRENQQREME KRIVTQLLTC MDGPGNKGDK NAPDSSAGFV LVIGATNRPD ALDPALRRSG
401: RFETEIALTA PDEDARAEIL SVVAQKLRLE GPFDKKRIAR LTPGFVGADL ESVAYLAGRK AIKRILDSRK SEQSGDGEDD KSWLRMPWPE EELEKLFVKM
501: SDFEEAVNLV QASLTREGFS IVPDVKWDDV GGLDHLRLQF NRYIVRPIKK PDIYKAFGVD LETGFLLYGP PGCGKTLIAK AAANEAGANF MHIKGAELLN
601: KYVGESELAI RTLFQRARTC APCVIFFDEV DALTTSRGKE GAWVVERLLN QFLVELDGGE RRNVYVIGAT NRPDVVDPAF LRPGRFGNLL YVPLPNADER
701: ASILKAIARK KPIDPSVDLD GIAKNNCEGF SGADLAHLVQ KATFQAVEEM IGSSESSEDD VTDITQCTIK TRHFEQALSL VSPSVNKQQR RHYDALSTKL
801: QESVGRNTEQ VTIGPSFTLE DEIEKARTKS

Arabidopsis Description

CDC48CCell division cycle 48C [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNC6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.