Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 3
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G299200.1 | Wheat | mitochondrion | 96.89 | 96.89 |
| TraesCS5A01G301500.1 | Wheat | mitochondrion | 93.97 | 95.54 |
| HORVU0Hr1G013350.2 | Barley | cytosol | 25.32 | 89.94 |
| HORVU5Hr1G078590.8 | Barley | plastid | 92.87 | 89.91 |
| TraesCS7D01G277100.1 | Wheat | cytosol, peroxisome, plastid | 54.2 | 54.4 |
| GSMUA_Achr11P... | Banana | cytosol | 51.65 | 50.4 |
| VIT_00s0125g00170.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 48.08 | 46.38 |
| CDX69950 | Canola | cytosol | 44.97 | 45.05 |
| CDY62119 | Canola | cytosol | 44.79 | 44.87 |
| Solyc04g057960.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 46.16 | 44.77 |
| Bra009342.1-P | Field mustard | cytosol | 45.16 | 44.07 |
| AT5G08470.1 | Thale cress | cytosol | 44.97 | 43.54 |
| KRH50491 | Soybean | cytosol | 44.88 | 43.45 |
| TraesCS3D01G153300.1 | Wheat | cytosol | 7.68 | 37.5 |
| TraesCS1D01G194500.1 | Wheat | cytosol | 9.05 | 37.36 |
| TraesCS1D01G340100.1 | Wheat | cytosol | 8.32 | 35.55 |
| TraesCS2D01G353100.1 | Wheat | cytosol | 14.44 | 27.82 |
| TraesCS2D01G476000.1 | Wheat | cytosol | 9.96 | 26.14 |
| TraesCS2D01G083900.1 | Wheat | golgi | 9.78 | 25.78 |
| TraesCS6D01G166700.1 | Wheat | cytosol, golgi | 9.78 | 25.6 |
| TraesCS6D01G149500.1 | Wheat | cytosol | 8.41 | 25.56 |
| TraesCS7D01G350300.1 | Wheat | cytosol | 9.78 | 25.3 |
| TraesCS3D01G153800.1 | Wheat | cytosol | 15.63 | 25.15 |
| TraesCS7D01G375500.1 | Wheat | cytosol | 8.96 | 24.5 |
| TraesCS7D01G532000.1 | Wheat | cytosol | 8.78 | 24.12 |
| TraesCS1D01G253100.1 | Wheat | cytosol | 17.46 | 23.88 |
| TraesCS1D01G223800.1 | Wheat | cytosol | 17.37 | 23.75 |
| TraesCS1D01G248000.1 | Wheat | cytosol | 17.09 | 23.7 |
| TraesCS1D01G399100.1 | Wheat | cytosol | 17.09 | 23.7 |
| TraesCS4D01G190600.1 | Wheat | cytosol, golgi | 9.69 | 23.56 |
| TraesCS3D01G154000.1 | Wheat | cytosol | 16.91 | 23.48 |
| TraesCS2D01G471200.1 | Wheat | cytosol | 9.69 | 23.4 |
| TraesCS2D01G087900.1 | Wheat | cytosol, golgi | 9.51 | 23.16 |
| TraesCS4D01G267800.1 | Wheat | cytosol | 17.09 | 23.0 |
| TraesCS4D01G267600.2 | Wheat | cytosol | 17.09 | 22.86 |
| TraesCS3D01G153900.1 | Wheat | cytosol | 16.45 | 22.84 |
| TraesCS3D01G443600.1 | Wheat | mitochondrion | 15.45 | 22.59 |
| TraesCS7D01G157200.1 | Wheat | cytosol | 8.78 | 22.54 |
| TraesCS5D01G081900.1 | Wheat | mitochondrion | 15.27 | 22.48 |
| TraesCS6D01G360700.1 | Wheat | cytosol | 15.08 | 22.42 |
| TraesCS6D01G326400.1 | Wheat | cytosol | 8.68 | 22.3 |
| TraesCS2D01G458300.3 | Wheat | mitochondrion | 18.74 | 21.97 |
| TraesCS7D01G134800.1 | Wheat | cytosol | 8.59 | 21.91 |
| TraesCS7D01G023600.1 | Wheat | mitochondrion | 15.72 | 21.91 |
| TraesCS3D01G417000.1 | Wheat | cytosol | 8.5 | 21.43 |
| TraesCS4D01G105500.2 | Wheat | cytosol, plastid | 18.19 | 19.78 |
| TraesCS1D01G073600.1 | Wheat | cytosol, plastid | 18.1 | 19.7 |
Protein Annotations
| Gene3D:1.10.8.60 | MapMan:23.4.1.5.1.1 | Gene3D:3.10.330.10 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ATPase_AAA_CS |
| InterPro:ATPase_AAA_core | InterPro:CDC48_domain_2-like_sf | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005777 | GO:GO:0005778 | GO:GO:0006625 | GO:GO:0006810 | GO:GO:0007031 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0042623 | InterPro:P-loop_NTPase |
| InterPro:PEX-N_psi_beta-barrel | PFAM:PF00004 | PFAM:PF09262 | ScanProsite:PS00674 | PANTHER:PTHR23077 | PANTHER:PTHR23077:SF12 |
| InterPro:Pex1 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF54585 | EnsemblPlantsGene:TraesCS5D01G306600 | EnsemblPlants:TraesCS5D01G306600.2 |
| TIGR:cd00009 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:402981326..402989427
Molecular Weight (calculated)
120089.0 Da
IEP (calculated)
6.046
GRAVY (calculated)
-0.106
Length
1094 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEVVVRTVPG VRSCFVALPL PVIQALERTA AGGSLPAVLA LELRGPDGAR WRLAWAGAVS ASASPDAVEV SQQFAACISL PDNTIASLSA VSALPKAKFV
0101: SVEPISEEDW EVLELNSELA EEAILKQVGI VYDGMKFPLW LHGDNVVEFL VISASPSNSI VQLVPGTEVA VAPKKRKGDA NSIECAPKQD LLKAQPHKKA
0201: LLRVQEAGGK YVDRFEYNGI QLGVFVTYAV QIHPDTAVKL SLGNLQLVSI TPKFSPKDST ESGKGSDQQI KGSVPGMKRN SHIVVHIILS DSVAKEHIML
0301: PQSIRCYIGT CAHSWVYVQR FSPAVNKNTP AITIRPLHFK MPERNSDDNS ELDCQEQDIF PTLGEISLAD DPLTDDNISM SRGFNDITAA ANWEESVKLK
0401: QERSFIRSWL IGQLKGISSH IAQPELNTVL LPSETLLHFQ VIDQSRGSPV DLIYLLTTTS DFGVKHKKNE LVTATEYGID NFEQALQKLE LNKATSLDST
0501: MERARKFFDR GLSSLSWLEN EFSDIEKRLS VLLSSASLKL LSRIKCPYPG NVLVYGPPGS GKTTLCKAVA RHFEEHKEIL AHVVYVDCSK LATEKNKKQL
0601: QQIADYIYEA IVHPPSVVIF DDLDSLISFS PDNLKSQSSN SSAIVKYLID MLDEYRDKSH GMCGYGPVAF LASAKSLKCL PQELTSSGRF DLHVQVPGLS
0701: VPARIEILRQ TIVKLHLLCS AEIISNIASK CDGYDAYDLE ILVDKAVLAA SDRLLGSSTV NLVEEDFLKA MRNFSPVAMR DISKFSPEIS NGWEDVGGLS
0801: EVVNVIKETI ELPLKYPKFF AGAPVRLRSN ILLYGPTGCG KTHVVKSVAA AYSLRFIPIK GPELMNMYIG STEQYVRDTF AKAAAAAPCL LFFDEFESLV
0901: PQRGKHGTQV TDRVVNQFLT ELDGVEALTG VFVFAATNKP REIDAALLRP GRFDRLVFCD FPQRNERLDI LRVLSKELPL ASNADLELLA SMTEGFSGAD
1001: LKAILTDAGL EAAKEAVRRQ PGDGSGDIPQ ELPLITRGTL MYVASEARPS TSEEDRRSLR EMFSQFSTSR KSSISTEKRR EANGQGQRVA VAES
0101: SVEPISEEDW EVLELNSELA EEAILKQVGI VYDGMKFPLW LHGDNVVEFL VISASPSNSI VQLVPGTEVA VAPKKRKGDA NSIECAPKQD LLKAQPHKKA
0201: LLRVQEAGGK YVDRFEYNGI QLGVFVTYAV QIHPDTAVKL SLGNLQLVSI TPKFSPKDST ESGKGSDQQI KGSVPGMKRN SHIVVHIILS DSVAKEHIML
0301: PQSIRCYIGT CAHSWVYVQR FSPAVNKNTP AITIRPLHFK MPERNSDDNS ELDCQEQDIF PTLGEISLAD DPLTDDNISM SRGFNDITAA ANWEESVKLK
0401: QERSFIRSWL IGQLKGISSH IAQPELNTVL LPSETLLHFQ VIDQSRGSPV DLIYLLTTTS DFGVKHKKNE LVTATEYGID NFEQALQKLE LNKATSLDST
0501: MERARKFFDR GLSSLSWLEN EFSDIEKRLS VLLSSASLKL LSRIKCPYPG NVLVYGPPGS GKTTLCKAVA RHFEEHKEIL AHVVYVDCSK LATEKNKKQL
0601: QQIADYIYEA IVHPPSVVIF DDLDSLISFS PDNLKSQSSN SSAIVKYLID MLDEYRDKSH GMCGYGPVAF LASAKSLKCL PQELTSSGRF DLHVQVPGLS
0701: VPARIEILRQ TIVKLHLLCS AEIISNIASK CDGYDAYDLE ILVDKAVLAA SDRLLGSSTV NLVEEDFLKA MRNFSPVAMR DISKFSPEIS NGWEDVGGLS
0801: EVVNVIKETI ELPLKYPKFF AGAPVRLRSN ILLYGPTGCG KTHVVKSVAA AYSLRFIPIK GPELMNMYIG STEQYVRDTF AKAAAAAPCL LFFDEFESLV
0901: PQRGKHGTQV TDRVVNQFLT ELDGVEALTG VFVFAATNKP REIDAALLRP GRFDRLVFCD FPQRNERLDI LRVLSKELPL ASNADLELLA SMTEGFSGAD
1001: LKAILTDAGL EAAKEAVRRQ PGDGSGDIPQ ELPLITRGTL MYVASEARPS TSEEDRRSLR EMFSQFSTSR KSSISTEKRR EANGQGQRVA VAES
0001: MSRNRQIIIP DDVMETEAVV NTVAGVDCFV SLPRQLLHAL QSTSSSPLPP LLPVELRSGD RRWSVAWSGS SSSSSAIEIA RVFAESISLP DGTVVKVRVL
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
0101: PNVPKATLVT VEPETEDDWE VLELNAELAE AAILSQVRIL HETMKFPLWL HDRTVIRFSV VSTFPSKGVV QLVPGTEVAV APKRRDRNLK AKKSQEKECN
0201: NVKALLRVQE TDRSAFHEAD VKGFELRVAL TSIAYIHPET AKKHSLESLQ LISVSPRIPL KGSAKKDEAL NMKNSEASKV AENGTSSAKK EPRQAILRLV
0301: FSDLAAKGHL MMVESLRLYL GAGLHSWVYL RGCNVNEDKE IPALSLSPCV FKISENEKVL DKGTDRLGNN NSVRKSSHPP SGLSTYVDVV DWSVHDKVVT
0401: ALSSEGLHDE GNHDKNKKGL EYLTRLWSLA QLDAMASVTG VDVSSLIVGR ETFFHFEVRG LESYKSIDGQ PSVNDRWESG KKDKHTPLEI LYVMTVSDES
0501: LLGDKFAGYD LSLDRSEKSD NVVHIEPVLE KMNLGEPIYL KSAKETHCNK GVSPDISSLT WMGPIVSDVI KRMTVLLSPA AGMWFSKFKI PSPGHILIYG
0601: PPGSGKTILA RAAAKYFEEQ KDLLAHVILV SCSTLALEKV QHIHHVLSSV IAEGLEHAPS VIILDDLDSI ISSSSDTEGT QASVGVTMLT KFLTDVIDDY
0701: GEYRNSSCGI GPLAFVASVQ SLEQIPQTLS SSGRFDFHVQ LAAPATSERG AILKHEIQKR LLDCSEDILL NLAAKCEGYD AYDLEILVDR AVHAAIGRHL
0801: PLESNISKYN LVKEDFTRAM HDFVPVAMRD ITKSASEGGR LGWEDVGGVT DIKNAIKEMI ELPSKFPKIF AKSPLRLRSN VLLYGPPGCG KTHIVGAAAA
0901: ACSLRFISVK GPELLNKYIG ASEQAVRDIF SKAAAAAPCI LFFDEFDSIA PKRGHDNTGV TDRVVNQFLT ELDGVEVLTG VFVFAATSRP DLLDPALLRP
1001: GRLDRLLLCD FPSPPERLEI LTVLSRKLLM ADDIDLEPIA LMTEGFSGAD LQALLSDAQL AAVHEYLNRE DKPETGTTPI ITDPLLKSIA SKTKPSVSET
1101: EKQKLYDIYS QFLDSRKSSR EAKGKRATLA
Arabidopsis Description
PEX1Peroxisome biogenesis protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNP1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.