Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19840 | Canola | cytosol | 92.13 | 91.28 |
| CDX80425 | Canola | cytosol | 90.28 | 88.24 |
| AT5G24270.4 | Thale cress | cytosol | 87.5 | 85.14 |
| CDY59968 | Canola | cytosol, plasma membrane | 87.04 | 85.07 |
| CDY44281 | Canola | cytosol | 86.57 | 84.62 |
| VIT_16s0098g01870.t01 | Wine grape | cytosol | 72.69 | 73.71 |
| PGSC0003DMT400050430 | Potato | cytosol | 69.91 | 70.56 |
| KRH53498 | Soybean | cytosol | 72.22 | 69.96 |
| Solyc06g051970.2.1 | Tomato | cytosol | 68.98 | 69.63 |
| KRH64445 | Soybean | cytosol | 70.83 | 68.61 |
| GSMUA_Achr4P08200_001 | Banana | cytosol | 62.04 | 61.19 |
| CDY28977 | Canola | cytosol | 60.19 | 61.03 |
| CDY64882 | Canola | mitochondrion | 60.19 | 60.75 |
| CDY46533 | Canola | mitochondrion | 60.19 | 60.75 |
| CDY40580 | Canola | cytosol | 59.72 | 60.56 |
| CDY09616 | Canola | cytosol | 59.72 | 60.56 |
| CDY69850 | Canola | cytosol | 59.72 | 60.56 |
| CDY25987 | Canola | cytosol | 59.72 | 60.56 |
| CDX90465 | Canola | cytosol | 59.26 | 60.09 |
| CDY38412 | Canola | cytosol | 58.8 | 59.62 |
| CDX78784 | Canola | cytosol | 58.33 | 59.15 |
| KXG32826 | Sorghum | cytosol | 59.26 | 58.72 |
| Os01t0598200-01 | Rice | cytosol, mitochondrion | 58.8 | 58.26 |
| CDY04300 | Canola | cytosol | 32.41 | 53.44 |
| Zm00001d044389_P001 | Maize | cytosol | 58.33 | 53.39 |
| CDY06547 | Canola | cytosol | 55.09 | 52.65 |
| CDY64981 | Canola | cytosol | 55.09 | 52.65 |
| CDX94315 | Canola | cytosol | 53.7 | 51.33 |
| CDY42728 | Canola | cytosol | 53.7 | 51.33 |
| CDX92814 | Canola | cytosol | 53.7 | 51.33 |
| CDX89324 | Canola | cytosol | 53.7 | 51.33 |
| CDY56859 | Canola | cytosol | 46.76 | 49.27 |
| Zm00001d010931_P001 | Maize | cytosol | 18.98 | 48.81 |
| CDX92464 | Canola | cytosol | 46.3 | 48.78 |
| CDY36774 | Canola | cytosol | 53.7 | 48.74 |
| CDY11963 | Canola | cytosol | 53.7 | 48.74 |
| CDY67196 | Canola | cytosol | 15.28 | 47.14 |
| CDX75314 | Canola | cytosol, endoplasmic reticulum | 54.17 | 46.99 |
| CDX68929 | Canola | cytosol, endoplasmic reticulum, mitochondrion | 54.17 | 46.99 |
| CDY45024 | Canola | cytosol | 53.24 | 46.75 |
| CDY28278 | Canola | cytosol | 53.24 | 46.75 |
| CDY13513 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 46.3 | 46.08 |
| CDY62266 | Canola | cytosol | 10.19 | 45.83 |
| CDY32236 | Canola | cytosol, extracellular | 47.22 | 44.93 |
| CDY34452 | Canola | cytosol, extracellular | 46.3 | 44.05 |
| CDX72384 | Canola | cytosol | 53.7 | 43.45 |
| CDX89325 | Canola | plastid | 46.76 | 36.73 |
| CDX94316 | Canola | plastid | 42.59 | 33.33 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:35.1 | GO:A0A078DIN1 | EnsemblPlants:CDX87133 | ProteinID:CDX87133 | ProteinID:CDX87133.1 |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | EnsemblPlantsGene:GSBRNA2T00146041001 |
| InterPro:IPR002048 | PFAM:PF13202 | PFAM:PF13499 | PRINTS:PR00450 | PFscan:PS50222 | PANTHER:PTHR23056 |
| PANTHER:PTHR23056:SF45 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0004EE70E9 | : | : |
Description
BnaC09g04480D
Coordinates
chrLK031849:+:671805..673517
Molecular Weight (calculated)
24988.9 Da
IEP (calculated)
4.697
GRAVY (calculated)
-0.328
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSLSKEKK NAIRPPGYEA PDVLASVTPF TVDEVEALYE LFKKLSNSII DDDLIHKEEF QLALFRNRNR KNLFADRIFD VFDVKRNGVI EFGEFVRSLG
101: VFHPNAPVHE KIKFSFKLYD LRQTGFIERE ELKEMVIALL HESELVLSED LIEAFMGADR KKDGKIDIDE WKDFVSMNPS LIKNMTLPYL KDIKGTFPSF
201: VSSCEDEESE SQNLYF
101: VFHPNAPVHE KIKFSFKLYD LRQTGFIERE ELKEMVIALL HESELVLSED LIEAFMGADR KKDGKIDIDE WKDFVSMNPS LIKNMTLPYL KDIKGTFPSF
201: VSSCEDEESE SQNLYF
001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS
Arabidopsis Description
CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.