Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- endoplasmic reticulum 3
- plasma membrane 3
- extracellular 3
- vacuole 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g021440.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | Solyc02g021440.2.1 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g054570.1.1 | Tomato | cytosol | 75.55 | 93.01 |
| PGSC0003DMT400046089 | Potato | cytosol | 79.04 | 92.82 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 66.38 | 67.26 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 58.08 | 60.73 |
| Solyc06g051970.2.1 | Tomato | cytosol | 55.46 | 59.35 |
| Zm00001d053293_P001 | Maize | cytosol | 50.22 | 59.28 |
| GSMUA_Achr1P13780_001 | Banana | cytosol | 50.22 | 58.97 |
| Solyc03g083320.2.1 | Tomato | cytosol | 54.59 | 58.41 |
| TraesCS1D01G261200.1 | Wheat | cytosol | 54.15 | 58.22 |
| HORVU1Hr1G064470.1 | Barley | cytosol | 54.15 | 58.22 |
| HORVU1Hr1G080790.11 | Barley | cytosol | 49.34 | 57.95 |
| GSMUA_Achr1P13790_001 | Banana | cytosol | 54.59 | 57.87 |
| Bra027703.1-P | Field mustard | mitochondrion | 53.71 | 57.48 |
| CDY46533 | Canola | mitochondrion | 53.71 | 57.48 |
| CDY64882 | Canola | mitochondrion | 53.71 | 57.48 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 53.28 | 57.01 |
| GSMUA_Achr3P03340_001 | Banana | cytosol | 52.4 | 56.6 |
| TraesCS1D01G358400.1 | Wheat | mitochondrion | 53.71 | 56.42 |
| Os02t0291000-00 | Rice | cytosol | 52.4 | 56.34 |
| EES06704 | Sorghum | cytosol | 52.4 | 56.34 |
| TraesCS1D01G346500.1 | Wheat | cytosol | 52.4 | 55.81 |
| TraesCS1D01G346400.1 | Wheat | cytosol | 52.4 | 55.81 |
| Os05t0534400-01 | Rice | plasma membrane | 51.09 | 55.71 |
| TraesCS1B01G272000.1 | Wheat | cytosol | 54.15 | 55.36 |
| TraesCS1A01G261200.1 | Wheat | cytosol | 54.15 | 55.36 |
| KXG22403 | Sorghum | cytosol | 51.09 | 55.19 |
| TraesCS1B01G370900.1 | Wheat | mitochondrion | 52.4 | 55.05 |
| TraesCS1A01G352200.1 | Wheat | cytosol | 53.28 | 54.95 |
| TraesCS1B01G370500.1 | Wheat | cytosol | 52.84 | 54.5 |
| Os02t0291400-00 | Rice | plasma membrane | 50.22 | 53.99 |
| TraesCS1B01G357200.1 | Wheat | cytosol | 50.22 | 53.49 |
| TraesCS1D01G358200.2 | Wheat | cytosol, plastid | 52.84 | 53.3 |
| TraesCS1B01G370800.1 | Wheat | cytosol | 51.09 | 52.7 |
| Solyc08g077770.2.1 | Tomato | cytosol | 48.03 | 51.64 |
| Solyc06g060980.1.1 | Tomato | cytosol, mitochondrion | 48.47 | 51.63 |
| Solyc07g065820.2.1 | Tomato | cytosol | 48.47 | 50.68 |
| Solyc12g015870.1.1 | Tomato | cytosol | 47.16 | 48.21 |
| Solyc08g007160.2.1 | Tomato | cytosol | 44.98 | 47.91 |
| Solyc08g065330.2.1 | Tomato | endoplasmic reticulum, extracellular | 51.97 | 46.3 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 28.82 | 44.9 |
| Solyc02g032310.1.1 | Tomato | cytosol | 41.92 | 43.84 |
| HORVU1Hr1G080820.4 | Barley | cytosol, nucleus, plastid | 48.03 | 43.48 |
| TraesCS4D01G162400.1 | Wheat | cytosol | 39.3 | 42.25 |
| Zm00001d038730_P001 | Maize | cytosol | 51.53 | 37.94 |
| HORVU1Hr1G080780.4 | Barley | golgi, nucleus | 52.84 | 25.91 |
Protein Annotations
| EnsemblPlants:Solyc08g036590.1.1 | EnsemblPlantsGene:Solyc08g036590.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF59 |
| PFAM:PF13202 | PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SignalP:SignalP-noTM |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000276C075 | UniProt:K4CK19 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr8:-:10904330..10906283
Molecular Weight (calculated)
26665.3 Da
IEP (calculated)
6.163
GRAVY (calculated)
-0.049
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MWFFLVLNWI MHSLKGCFCL KKSRHLLETH DTLASETCFS VNDVEALYIL YKRLSRSIID DGLIHKEVFV QALFSCSHRQ NLFADRLFDV FDVKRNGIIE
101: FGEFVRSLSI FHPKAPQQDK ITFAFKVYDL KNTGYIERDE VKDMVLAILE ESKLTLANDT IEAMVHKTIE EADLNGDGRI DPKEWKELVR RYPSLINNMT
201: LPYLEEVTVL FPCFVITSKV RDSQLVFGN
101: FGEFVRSLSI FHPKAPQQDK ITFAFKVYDL KNTGYIERDE VKDMVLAILE ESKLTLANDT IEAMVHKTIE EADLNGDGRI DPKEWKELVR RYPSLINNMT
201: LPYLEEVTVL FPCFVITSKV RDSQLVFGN
001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
Arabidopsis Description
CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.