Factsheet for TraesCS1D01G346400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	TraesCS2A01G251800.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2B01G271700.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2D01G252600.1	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G346500.1	Wheat	cytosol	99.07	99.07
TraesCS1B01G357200.1	Wheat	cytosol	91.16	91.16
TraesCS1D01G261200.1	Wheat	cytosol	87.91	88.73
Os02t0291000-00	Rice	cytosol	81.86	82.63
EES06704	Sorghum	cytosol	78.14	78.87
Os02t0291400-00	Rice	plasma membrane	78.14	78.87
Zm00001d053293_P001	Maize	cytosol	70.23	77.84
GSMUA_Achr3P03340_001	Banana	cytosol	64.19	65.09
TraesCS1D01G358400.1	Wheat	mitochondrion	63.26	62.39
TraesCS1D01G358200.2	Wheat	cytosol, plastid	64.65	61.23
PGSC0003DMT400046089	Potato	cytosol	53.95	59.49
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	62.33	59.29
VIT_02s0025g01640.t01	Wine grape	cytosol	59.53	58.45
Bra027703.1-P	Field mustard	mitochondrion	57.21	57.48
CDY64882	Canola	mitochondrion	56.74	57.01
CDY46533	Canola	mitochondrion	56.74	57.01
AT1G64480.1	Thale cress	cytosol, mitochondrion	56.28	56.54
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	55.81	52.4
TraesCS4D01G068700.1	Wheat	cytosol	52.09	49.78
Solyc08g054570.1.1	Tomato	cytosol	42.79	49.46
TraesCS5D01G072100.1	Wheat	cytosol	51.63	49.33
TraesCS5D01G132500.2	Wheat	cytosol	51.16	48.67
TraesCS4D01G162400.1	Wheat	cytosol	46.98	47.42
TraesCS3D01G211300.1	Wheat	cytosol	54.88	40.97

Protein Annotations

EnsemblPlants:TraesCS1D01G346400.1	EnsemblPlantsGene:TraesCS1D01G346400	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF59
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:-:433968991..433981506

Molecular Weight (calculated)

24897.7 Da

IEP (calculated)

4.531

GRAVY (calculated)

-0.322

Length

215 amino acids

Sequence
(BLAST)

001: MGCASSKQFK RAPRHEDAAL LAKETTFSLD EVKALYELFE KISYSIFKDG LIHKEEFQLA LFRNSNRKNL FADRIFDLFD LKRNGVIEFD EFVRSLQIFH
101: PDTPMADKIA FAFRLYDLRG TGRIEREELK EMVLAILSES DLLLSDDAVE QMVDQTFTEA DLNGDGRIDP DEWKALTSTN PALLKYMTLP YLKDMTMSSF
201: PSFILYPRTG DEELY

Best Arabidopsis Sequence Match ( AT4G17615.4 )
(BLAST)

001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT

Arabidopsis Description

CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.