Factsheet for TraesCS1D01G261200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	TraesCS2A01G251800.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2B01G271700.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2D01G252600.1	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G064470.1	Barley	cytosol	98.59	98.59
TraesCS1B01G272000.1	Wheat	cytosol	99.53	94.64
TraesCS1A01G261200.1	Wheat	cytosol	99.53	94.64
TraesCS1D01G346500.1	Wheat	cytosol	89.67	88.84
Os02t0291000-00	Rice	cytosol	88.26	88.26
TraesCS1D01G346400.1	Wheat	cytosol	88.73	87.91
EES06704	Sorghum	cytosol	85.92	85.92
Os02t0291400-00	Rice	plasma membrane	83.1	83.1
Zm00001d053293_P001	Maize	cytosol	75.59	82.99
GSMUA_Achr3P03340_001	Banana	cytosol	68.08	68.4
TraesCS1D01G358400.1	Wheat	mitochondrion	69.48	67.89
TraesCS1D01G358200.2	Wheat	cytosol, plastid	70.42	66.08
VIT_02s0025g01640.t01	Wine grape	cytosol	63.38	61.64
PGSC0003DMT400046089	Potato	cytosol	56.34	61.54
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	64.32	60.62
Bra027703.1-P	Field mustard	mitochondrion	59.62	59.35
AT1G64480.1	Thale cress	cytosol, mitochondrion	59.15	58.88
CDY46533	Canola	mitochondrion	59.15	58.88
CDY64882	Canola	mitochondrion	59.15	58.88
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	58.22	54.15
TraesCS4D01G068700.1	Wheat	cytosol	55.4	52.44
TraesCS5D01G072100.1	Wheat	cytosol	54.93	52.0
TraesCS5D01G132500.2	Wheat	cytosol	54.93	51.77
Solyc08g054570.1.1	Tomato	cytosol	44.6	51.08
TraesCS4D01G162400.1	Wheat	cytosol	49.77	49.77
TraesCS3D01G211300.1	Wheat	cytosol	60.09	44.44

Protein Annotations

EnsemblPlants:TraesCS1D01G261200.1	EnsemblPlantsGene:TraesCS1D01G261200	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF59
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SMART:SM00054
SUPFAM:SSF47473	TIGR:cd00051	MapMan:26.6.1.1.1	:	:	:

Description

No Description!

Coordinates

chr1D:+:355429660..355431314

Molecular Weight (calculated)

24489.1 Da

IEP (calculated)

4.589

GRAVY (calculated)

-0.299

Length

213 amino acids

Sequence
(BLAST)

001: MGCASSKQFR RAPPHEDAAL LAKETTFSLN EVEALYELFK KISYSIFKDG LIHKEEFQLA LFRNSNRKNL FADRIFDLFD LKRNGVIEFE EFVRSLHIFH
101: PDTPMADKIA FAFRLYDLRG TGSIEREELK EMVLAILNES DLLLSDDAVE QIVDQTFKQA DLNSDGRIDP DEWKEFASKN PALLKNMTLP YLKDITMSFP
201: SFVVYSGAGD EEL

Best Arabidopsis Sequence Match ( AT5G24270.2 )
(BLAST)

001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS

Arabidopsis Description

CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.