Factsheet for TraesCS1D01G358400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	TraesCS2A01G251800.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2B01G271700.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2D01G252600.1	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G370900.1	Wheat	mitochondrion	96.33	96.33
TraesCS1D01G358200.2	Wheat	cytosol, plastid	91.28	87.67
Os05t0534400-01	Rice	plasma membrane	81.65	84.76
KXG22403	Sorghum	cytosol	79.82	82.08
GSMUA_Achr1P13790_001	Banana	cytosol	71.1	71.76
GSMUA_Achr1P13780_001	Banana	cytosol	63.3	70.77
TraesCS1D01G261200.1	Wheat	cytosol	67.89	69.48
VIT_02s0025g01640.t01	Wine grape	cytosol	64.68	64.38
TraesCS1D01G346500.1	Wheat	cytosol	62.39	63.26
TraesCS1D01G346400.1	Wheat	cytosol	62.39	63.26
TraesCS4D01G162400.1	Wheat	cytosol	61.47	62.91
AT1G64480.1	Thale cress	cytosol, mitochondrion	60.09	61.22
CDY64882	Canola	mitochondrion	60.09	61.22
CDY46533	Canola	mitochondrion	60.09	61.22
Bra027703.1-P	Field mustard	mitochondrion	60.09	61.22
PGSC0003DMT400046089	Potato	cytosol	53.67	60.0
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	61.01	58.85
Zm00001d038730_P001	Maize	cytosol	79.36	55.63
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	56.42	53.71
TraesCS5D01G132500.2	Wheat	cytosol	54.13	52.21
TraesCS4D01G068700.1	Wheat	cytosol	53.67	52.0
TraesCS5D01G072100.1	Wheat	cytosol	53.21	51.56
Solyc08g054570.1.1	Tomato	cytosol	41.28	48.39
HORVU1Hr1G080780.4	Barley	golgi, nucleus	94.95	44.33
TraesCS3D01G211300.1	Wheat	cytosol	55.5	42.01

Protein Annotations

EnsemblPlants:TraesCS1D01G358400.1	EnsemblPlantsGene:TraesCS1D01G358400	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF45
PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:+:442050614..442052039

Molecular Weight (calculated)

24875.3 Da

IEP (calculated)

4.595

GRAVY (calculated)

-0.373

Length

218 amino acids

Sequence
(BLAST)

001: MGCVLSSPRR SRRTPGYEEP TVLASQTSFT VNEVEALYEL YKKLSYSIFK DGLIHKEEFR LALFRTSKGA NLFADRVFDL FDLKRNGVIE FGEFVRSLSI
101: FHPKAPESDK TAFAFKLYDL RGTGYIEKEE LREMVVALLD ESDLCLSDSA VEEIVDNTFS QADSNGDDRI DPKEWEEFVK KNPASLRNMS LPYLQDITTA
201: FPSFVMHSEV DDYSGISK

Best Arabidopsis Sequence Match ( AT1G64480.1 )
(BLAST)

001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED

Arabidopsis Description

CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.