Factsheet for GSMUA_Achr1P13790_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	GSMUA_Achr4P23000_001	AT1G30270.1	16814720
AT1G64480.1	GSMUA_Achr4P31540_001	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P13780_001	Banana	cytosol	81.94	90.77
Os05t0534400-01	Rice	plasma membrane	72.69	74.76
KXG22403	Sorghum	cytosol	71.76	73.11
HORVU1Hr1G080790.11	Barley	cytosol	64.81	71.79
TraesCS1B01G370900.1	Wheat	mitochondrion	71.76	71.1
TraesCS1D01G358400.1	Wheat	mitochondrion	71.76	71.1
GSMUA_Achr4P08200_001	Banana	cytosol	70.83	69.86
GSMUA_Achr3P03340_001	Banana	cytosol	68.52	69.81
VIT_02s0025g01640.t01	Wine grape	cytosol	69.91	68.95
TraesCS1A01G352200.1	Wheat	cytosol	70.83	68.92
TraesCS1B01G370500.1	Wheat	cytosol	70.37	68.47
TraesCS1D01G358200.2	Wheat	cytosol, plastid	70.83	67.4
TraesCS1B01G370800.1	Wheat	cytosol	67.59	65.77
Bra027703.1-P	Field mustard	mitochondrion	64.81	65.42
CDY64882	Canola	mitochondrion	64.35	64.95
CDY46533	Canola	mitochondrion	63.89	64.49
AT1G64480.1	Thale cress	cytosol, mitochondrion	63.43	64.02
PGSC0003DMT400046089	Potato	cytosol	55.56	61.54
GSMUA_AchrUn_...	Banana	cytosol	60.65	61.5
TraesCS1B01G370600.1	Wheat	nucleus	41.67	61.22
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	63.43	60.62
GSMUA_Achr4P26350_001	Banana	cytosol	59.72	60.56
GSMUA_Achr4P30070_001	Banana	cytosol	58.8	59.62
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	57.87	54.59
GSMUA_Achr9P12840_001	Banana	cytosol	55.56	53.1
GSMUA_Achr4P09270_001	Banana	cytosol	54.63	52.21
HORVU1Hr1G080820.4	Barley	cytosol, nucleus, plastid	60.65	51.78
TraesCS4D01G162400.1	Wheat	cytosol	50.93	51.64
Solyc08g054570.1.1	Tomato	cytosol	43.98	51.08
GSMUA_AchrUn_...	Banana	cytosol	51.39	49.12
Zm00001d038730_P001	Maize	cytosol	70.37	48.87
GSMUA_Achr3P32370_001	Banana	cytosol	53.7	43.94
HORVU1Hr1G080780.4	Barley	golgi, nucleus	71.76	33.19

Protein Annotations

EnsemblPlants:GSMUA_Achr1P13790_001	EnsemblPlants:GSMUA_Achr1T13790_001	EnsemblPlantsGene:GSMUA_Achr1G13790_001	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005509	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056
PANTHER:PTHR23056:SF59	PFAM:PF13499	PFAM:PF13833	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI00029518FF	UniProt:M0RZN7	MapMan:26.6.1.1.1	:

Description

Calcineurin B-like protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr1G13790_001]

Coordinates

chr1:+:10520878..10528915

Molecular Weight (calculated)

24704.5 Da

IEP (calculated)

4.710

GRAVY (calculated)

-0.188

Length

216 amino acids

Sequence
(BLAST)

001: MGCVSSKHVV KHPPGYEDPV ILASETAFTV HEVEALYELF KKLSFSIIKD GLIHKEEFQL ALFRNSNRKN LFADRVFDLF DIKNNGVIEF GEFVRSLSIF
101: HPNTPKAEKI AFAFKLYDLR QTGYIEREEL KEMVLALLDE SDVFLSNDIV ETIVGNTFVQ ADLNGDGKID LDEWREFVKK NPSLIRNMTL PYLKDISMAF
201: PSFVMHSEGS DDPDTT

Best Arabidopsis Sequence Match ( AT5G24270.2 )
(BLAST)

001: MGCSVSKKKK KNAMRPPGYE DPELLASVTP FTVEEVEALY ELFKKLSSSI IDDGLIHKEE FQLALFRNRN RRNLFADRIF DVFDVKRNGV IEFGEFVRSL
101: GVFHPSAPVH EKVKFAFKLY DLRQTGFIER EELKEMVVAL LHESELVLSE DMIEVMVDKA FVQADRKNDG KIDIDEWKDF VSLNPSLIKN MTLPYLKDIN
201: RTFPSFVSSC EEEEMELQNV SS

Arabidopsis Description

CBL4Calcineurin B-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O81223]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.