Factsheet for TraesCS1D01G358200.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	TraesCS2A01G251800.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2B01G271700.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2D01G252600.1	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G352200.1	Wheat	cytosol	93.83	95.95
TraesCS1B01G370500.1	Wheat	cytosol	93.83	95.95
TraesCS1D01G358400.1	Wheat	mitochondrion	87.67	91.28
Os05t0534400-01	Rice	plasma membrane	78.41	84.76
KXG22403	Sorghum	cytosol	76.65	82.08
HORVU1Hr1G080820.4	Barley	cytosol, nucleus, plastid	81.5	73.12
GSMUA_Achr1P13780_001	Banana	cytosol	61.23	71.28
GSMUA_Achr1P13790_001	Banana	cytosol	67.4	70.83
TraesCS1D01G261200.1	Wheat	cytosol	66.08	70.42
TraesCS4D01G162400.1	Wheat	cytosol	60.79	64.79
TraesCS1D01G346500.1	Wheat	cytosol	61.23	64.65
TraesCS1D01G346400.1	Wheat	cytosol	61.23	64.65
VIT_02s0025g01640.t01	Wine grape	cytosol	60.79	63.01
AT1G64480.1	Thale cress	cytosol, mitochondrion	58.59	62.15
Bra027703.1-P	Field mustard	mitochondrion	57.71	61.22
CDY64882	Canola	mitochondrion	57.71	61.22
CDY46533	Canola	mitochondrion	57.71	61.22
PGSC0003DMT400046089	Potato	cytosol	51.1	59.49
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	57.27	57.52
Zm00001d038730_P001	Maize	cytosol	76.21	55.63
TraesCS4D01G068700.1	Wheat	cytosol	52.86	53.33
TraesCS5D01G072100.1	Wheat	cytosol	52.42	52.89
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	53.3	52.84
TraesCS5D01G132500.2	Wheat	cytosol	52.42	52.65
Solyc08g054570.1.1	Tomato	cytosol	39.21	47.85
TraesCS3D01G211300.1	Wheat	cytosol	55.51	43.75

Protein Annotations

EnsemblPlants:TraesCS1D01G358200.2	EnsemblPlantsGene:TraesCS1D01G358200	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF45
PFAM:PF13202	PFAM:PF13499	PFscan:PS50222	PRINTS:PR00450	ScanProsite:PS00018	SEG:seg
SMART:SM00054	SUPFAM:SSF47473	TIGR:cd00051	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1D:+:441750173..441751596

Molecular Weight (calculated)

25732.2 Da

IEP (calculated)

4.456

GRAVY (calculated)

-0.374

Length

227 amino acids

Sequence
(BLAST)

001: MGCAWSSSPS PSPSKREQRA QGYEEPAVLA AETSFTVNEV EALYELYKKL SYSIFKDGLI HKVVEEEFRL ALFRTSKGAN LFADRVFDLF DLKRNGVIEF
101: GEFVRSLSIF HPKAPESEKT AFAFKLYDLR GTGYIEKEEL REMVVALLDE SDLCLSDSAV EEIVDNTFSQ ADSDGDGRID PKEWQEFVKK NPASLRNMSL
201: PYLQDITTTF PSFVMHSEVE DYTGVSK

Best Arabidopsis Sequence Match ( AT1G64480.1 )
(BLAST)

001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED

Arabidopsis Description

CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.