Factsheet for TraesCS1B01G370600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G251800.1
TraesCS2B01G271700.1
TraesCS2D01G252600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G64480.1	TraesCS2A01G251800.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2B01G271700.1	AT1G30270.1	16814720
AT1G64480.1	TraesCS2D01G252600.1	AT1G30270.1	16814720

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G370500.1	Wheat	cytosol	87.76	58.11
TraesCS1B01G370800.1	Wheat	cytosol	85.71	56.76
TraesCS1B01G370900.1	Wheat	mitochondrion	82.31	55.5
HORVU1Hr1G080790.11	Barley	cytosol	67.35	50.77
Os05t0534400-01	Rice	plasma membrane	72.11	50.48
KXG22403	Sorghum	cytosol	72.79	50.47
GSMUA_Achr1P13790_001	Banana	cytosol	61.22	41.67
GSMUA_Achr1P13780_001	Banana	cytosol	54.42	41.03
TraesCS1B01G272000.1	Wheat	cytosol	61.9	40.62
TraesCS1B01G357200.1	Wheat	cytosol	55.78	38.14
VIT_02s0025g01640.t01	Wine grape	cytosol	53.06	35.62
AT1G64480.1	Thale cress	cytosol, mitochondrion	51.7	35.51
CDY64882	Canola	mitochondrion	50.34	34.58
CDY46533	Canola	mitochondrion	50.34	34.58
Bra027703.1-P	Field mustard	mitochondrion	50.34	34.58
Solyc08g054570.1.1	Tomato	cytosol	42.86	33.87
TraesCS1B01G229300.1	Wheat	cytosol	48.98	33.49
Zm00001d038730_P001	Maize	cytosol	70.75	33.44
Solyc12g055920.1.1	Tomato	cytosol, mitochondrion	49.66	32.3
PGSC0003DMT400046089	Potato	cytosol	41.5	31.28
TraesCS4B01G379200.1	Wheat	cytosol	42.86	31.03
TraesCS5B01G071500.1	Wheat	cytosol	46.26	30.22
TraesCS5B01G124300.1	Wheat	cytosol	44.9	29.2
Solyc08g036590.1.1	Tomato	endoplasmic reticulum, extracellular	44.9	28.82
TraesCS3B01G235500.1	Wheat	cytosol	49.66	25.35
TraesCS3B01G064500.2	Wheat	cytosol, golgi, mitochondrion	46.94	23.31
TraesCS4B01G069900.1	Wheat	cytosol	40.14	22.69

Protein Annotations

EnsemblPlants:TraesCS1B01G370600.1	EnsemblPlantsGene:TraesCS1B01G370600	Gene3D:1.10.238.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:IPR002048	PANTHER:PTHR23056	PANTHER:PTHR23056:SF59
PFAM:PF13202	PFscan:PS50222	ScanProsite:PS00018	SEG:seg	SUPFAM:SSF47473	MapMan:35.1

Description

No Description!

Coordinates

chr1B:+:600258102..600259666

Molecular Weight (calculated)

16417.1 Da

IEP (calculated)

4.278

GRAVY (calculated)

-0.459

Length

147 amino acids

Sequence
(BLAST)

001: MGCASSSPSP SKREQRAQGY QEPAVLAAET SFTANEVEAL YELYKKLSYS IFKDGLIHKL REMVVALLDE SDLCLSDSAV DEIVDYTFGQ ADSNGDGRID
101: PKEWEEFVKK NPTSLRNMSL PYLQDITTSF PSFVMHSEVE NYDGVGK

Best Arabidopsis Sequence Match ( AT4G17615.2 )
(BLAST)

001: MLFFNPGFTC MQEEFQLALF KSRKRENIFA NRIFDMFDVK RKGVIDFGDF VRSLNVFHPN ASLEDKIDFT FRLYDMDCTG YIERQEVKQM LIALLCESEM
101: KLADETIEII LDKTFEDADV NQDGKIDKLE WSDFVNKNPS LLKIMTLPYL RDITTTFPSF VFHSEVDEIA T

Arabidopsis Description

CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.