Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G251800.1 | |
| TraesCS2B01G271700.1 | |
| TraesCS2D01G252600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | TraesCS2A01G251800.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2B01G271700.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2D01G252600.1 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G346500.1 | Wheat | cytosol | 91.63 | 91.63 |
| TraesCS1D01G346400.1 | Wheat | cytosol | 91.16 | 91.16 |
| TraesCS1B01G272000.1 | Wheat | cytosol | 85.58 | 82.14 |
| Os02t0291000-00 | Rice | cytosol | 80.47 | 81.22 |
| EES06704 | Sorghum | cytosol | 77.21 | 77.93 |
| Os02t0291400-00 | Rice | plasma membrane | 75.81 | 76.53 |
| Zm00001d053293_P001 | Maize | cytosol | 68.37 | 75.77 |
| GSMUA_Achr3P03340_001 | Banana | cytosol | 61.86 | 62.74 |
| TraesCS1B01G370900.1 | Wheat | mitochondrion | 63.26 | 62.39 |
| TraesCS1B01G370500.1 | Wheat | cytosol | 61.4 | 59.46 |
| TraesCS1B01G370800.1 | Wheat | cytosol | 60.93 | 59.01 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 60.0 | 58.9 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 38.14 | 55.78 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 58.6 | 55.75 |
| Bra027703.1-P | Field mustard | mitochondrion | 54.42 | 54.67 |
| PGSC0003DMT400046089 | Potato | cytosol | 49.3 | 54.36 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 53.95 | 54.21 |
| CDY64882 | Canola | mitochondrion | 53.95 | 54.21 |
| CDY46533 | Canola | mitochondrion | 53.95 | 54.21 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 53.02 | 53.02 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 49.3 | 52.22 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 53.49 | 50.22 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 51.63 | 49.33 |
| TraesCS5B01G124300.1 | Wheat | cytosol | 50.23 | 47.79 |
| Solyc08g054570.1.1 | Tomato | cytosol | 40.0 | 46.24 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 54.42 | 40.62 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 48.84 | 40.38 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 54.42 | 39.53 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G357200.1 | EnsemblPlantsGene:TraesCS1B01G357200 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF59 |
| PFAM:PF13499 | PFAM:PF13833 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SMART:SM00054 |
| SUPFAM:SSF47473 | TIGR:cd00051 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:587035491..587047829
Molecular Weight (calculated)
24612.3 Da
IEP (calculated)
4.496
GRAVY (calculated)
-0.267
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCASSKQFK RAPRHGDAAL LAKETTVSLD EVKALYEFFE KISYSIFKDG LIHKEEFQLA LFRNSNRKSL FADRIFDLFD MKRNGVIEFD EFARSLQFFH
101: PDTPMADKIA FAFRLYDLRG TGSIEREELK EMVLAILNES DLLLSDDAVE QMVDQTFKEA DLNGDGKIDP DEWKAFTSAN PALLNYMTLP YLKDMTMPSF
201: PSFVLYSVTG DEGLY
101: PDTPMADKIA FAFRLYDLRG TGSIEREELK EMVLAILNES DLLLSDDAVE QMVDQTFKEA DLNGDGKIDP DEWKAFTSAN PALLNYMTLP YLKDMTMPSF
201: PSFVLYSVTG DEGLY
001: MGCFHSKAAK EFRGHEDPVK LASETAFSVS EVEALFELFK SISSSVVDDG LINKEEFQLA LFKSRKRENI FANRIFDMFD VKRKGVIDFG DFVRSLNVFH
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
101: PNASLEDKID FTFRLYDMDC TGYIERQEVK QMLIALLCES EMKLADETIE IILDKTFEDA DVNQDGKIDK LEWSDFVNKN PSLLKIMTLP YLRDITTTFP
201: SFVFHSEVDE IAT
Arabidopsis Description
CBL1calcineurin B-like protein 1 [Source:TAIR;Acc:AT4G17615]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.