Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS2A01G251800.1 | |
| TraesCS2B01G271700.1 | |
| TraesCS2D01G252600.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G64480.1 | TraesCS2A01G251800.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2B01G271700.1 | AT1G30270.1 | 16814720 |
| AT1G64480.1 | TraesCS2D01G252600.1 | AT1G30270.1 | 16814720 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G370500.1 | Wheat | cytosol | 86.94 | 86.94 |
| TraesCS1B01G370600.1 | Wheat | nucleus | 56.76 | 85.71 |
| HORVU1Hr1G080790.11 | Barley | cytosol | 74.77 | 85.13 |
| TraesCS1B01G370900.1 | Wheat | mitochondrion | 83.33 | 84.86 |
| Os05t0534400-01 | Rice | plasma membrane | 76.58 | 80.95 |
| KXG22403 | Sorghum | cytosol | 75.23 | 78.77 |
| GSMUA_Achr1P13780_001 | Banana | cytosol | 59.91 | 68.21 |
| GSMUA_Achr1P13790_001 | Banana | cytosol | 65.77 | 67.59 |
| TraesCS1B01G272000.1 | Wheat | cytosol | 64.86 | 64.29 |
| TraesCS1B01G357200.1 | Wheat | cytosol | 59.01 | 60.93 |
| VIT_02s0025g01640.t01 | Wine grape | cytosol | 59.01 | 59.82 |
| AT1G64480.1 | Thale cress | cytosol, mitochondrion | 56.31 | 58.41 |
| PGSC0003DMT400046089 | Potato | cytosol | 50.9 | 57.95 |
| CDY64882 | Canola | mitochondrion | 55.86 | 57.94 |
| CDY46533 | Canola | mitochondrion | 55.86 | 57.94 |
| Bra027703.1-P | Field mustard | mitochondrion | 55.86 | 57.94 |
| Solyc12g055920.1.1 | Tomato | cytosol, mitochondrion | 57.21 | 56.19 |
| TraesCS1B01G229300.1 | Wheat | cytosol | 54.05 | 55.81 |
| Zm00001d038730_P001 | Maize | cytosol | 74.77 | 53.38 |
| TraesCS4B01G379200.1 | Wheat | cytosol | 47.3 | 51.72 |
| Solyc08g036590.1.1 | Tomato | endoplasmic reticulum, extracellular | 52.7 | 51.09 |
| TraesCS5B01G071500.1 | Wheat | cytosol | 51.35 | 50.67 |
| TraesCS5B01G124300.1 | Wheat | cytosol | 51.35 | 50.44 |
| Solyc08g054570.1.1 | Tomato | cytosol | 38.74 | 46.24 |
| TraesCS3B01G235500.1 | Wheat | cytosol | 53.6 | 41.32 |
| TraesCS4B01G069900.1 | Wheat | cytosol | 46.4 | 39.62 |
| TraesCS3B01G064500.2 | Wheat | cytosol, golgi, mitochondrion | 52.25 | 39.19 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G370800.1 | EnsemblPlantsGene:TraesCS1B01G370800 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23056 | PANTHER:PTHR23056:SF45 |
| PFAM:PF13202 | PFAM:PF13499 | PFscan:PS50222 | PRINTS:PR00450 | ScanProsite:PS00018 | SEG:seg |
| SMART:SM00054 | SUPFAM:SSF47473 | TIGR:cd00051 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1B:+:600523292..600525212
Molecular Weight (calculated)
25169.5 Da
IEP (calculated)
4.654
GRAVY (calculated)
-0.359
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAWSSSSS PSRRQRRAQG YEEPAVLAAE TSFTVSEVEA LYELYNKLSY SIFKDGLIHK EEFRLALFRT SERANLFADR VFHLFDLKRN GVIEFGEFVR
101: SLSIFHPKAL VSDKAAFAFK LYDLRGTGYI EKEELREMVV ALLDESDLCL SDSAVDEIVD NTFSQADTNG DGRLDPKEWE EFVKKNPTSL RNMSLPYLQD
201: ITTTFPSFAT HSEVNDCGGV DK
101: SLSIFHPKAL VSDKAAFAFK LYDLRGTGYI EKEELREMVV ALLDESDLCL SDSAVDEIVD NTFSQADTNG DGRLDPKEWE EFVKKNPTSL RNMSLPYLQD
201: ITTTFPSFAT HSEVNDCGGV DK
001: MLAFVKCFSL KRAKHPRGYE DPHVLASETP FTVNEIEALH DLFKKLSTSI INDGLIHKEE FLLALFRNGS MQNLFADRVF YMFDRKRNGV IEFGEFVRSL
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
101: SIFHPYTPEH EKSAFMFKLF DLHGTGFIEP HELKKMVGAL LGETDLELSE ESIEAIVEQT MLEVDTNKDG KIDEEEWKEL VAKNPSILKN MTLPYLKEVT
201: LAFPSFVLDS EVED
Arabidopsis Description
CBL8Calcineurin B-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUQ7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.