Factsheet for GSMUA_Achr1P05590_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g02990.t01	Wine grape	cytosol	71.91	69.58
Solyc11g069310.1.1	Tomato	cytosol	36.34	66.51
PGSC0003DMT400020938	Potato	cytosol	68.81	66.09
KRH26430	Soybean	cytosol	65.98	62.59
KRH22907	Soybean	cytosol	65.98	62.44
AT5G60550.1	Thale cress	mitochondrion	64.95	61.92
KRH24883	Soybean	cytosol, plastid	65.21	61.86
CDY09195	Canola	mitochondrion	64.43	61.43
Bra020241.1-P	Field mustard	mitochondrion	64.43	61.43
AT3G45240.1	Thale cress	cytosol	62.37	61.11
CDY31536	Canola	cytosol	64.95	61.02
Bra002472.1-P	Field mustard	cytosol	64.95	61.02
CDX80157	Canola	cytosol	64.95	60.87
GSMUA_Achr1P22030_001	Banana	cytosol	50.52	59.76
Os03t0711300-01	Rice	cytosol	64.43	58.69
KRH29938	Soybean	mitochondrion	64.95	58.6
Zm00001d002827_P003	Maize	cytosol	60.82	56.19
KXG37739	Sorghum	cytosol	61.34	55.87
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	13.66	55.79
Zm00001d025946_P003	Maize	cytosol	60.82	55.4
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	58.76	55.34
TraesCS1D01G451100.1	Wheat	cytosol, plastid	59.79	55.24
TraesCS4A01G268200.1	Wheat	cytosol	60.31	54.93
TraesCS4B01G046100.1	Wheat	cytosol	60.05	54.69
TraesCS4D01G045900.1	Wheat	cytosol	59.79	54.46
TraesCS1B01G477300.1	Wheat	cytosol	58.51	53.66
Solyc11g069300.1.1	Tomato	cytosol	25.77	52.36
HORVU4Hr1G007440.1	Barley	cytosol	60.05	52.13
HORVU1Hr1G094990.20	Barley	cytosol, plastid	53.35	48.94
OQU82027	Sorghum	cytosol	61.6	48.88
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	16.24	41.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G05590_001	EnsemblPlants:GSMUA_Achr1P05590_001	EnsemblPlants:GSMUA_Achr1T05590_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RXB7
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002969F12

Description

CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G05590_001]

Coordinates

chr1:+:4623248..4631788

Molecular Weight (calculated)

43728.4 Da

IEP (calculated)

6.248

GRAVY (calculated)

-0.326

Length

388 amino acids

Sequence
(BLAST)

001: MGCCGCFGFL RKRHRSLMPL RGSGAPLSQE FLLPENMDDA DGIFYNGDYA NTLDGSDTDL QRPSKRSEEI ISDRAKKGLI CREVPVKETR KVIVSEDNSG
101: NKMVNEYIRE CKIGSGSYGK VVLYRSIKDG KQYAIKIFHK SHLLKLRVAP SETAMTDVFR EVAIMKMLDH PNIVNLIEVI DDPDTDHFYM VLEYVEGKWV
201: FEGSGAGNNL GESTTRRYLR DIVAGLMYLH SHNVVHGDIK PDNLLVTRNN NVKIGDFSVS QVFEDDNDVL WRSPGTPVFT APECCLGLTY RGKPADTWAL
301: GVTLYCMIFG QYPFLGDTLQ DTYDKIVNSP LIIPDEINPQ LRSLLEGLLC KDPQNRFTLR VVSEHPWVVG DEGPIPEYLC KCRRKSSA

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.