CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29938	Soybean	mitochondrion	93.15	88.6
KRH26430	Soybean	cytosol	72.86	72.86
KRH22907	Soybean	cytosol	72.13	71.95
VIT_06s0004g02990.t01	Wine grape	cytosol	67.97	69.33
Solyc11g069310.1.1	Tomato	cytosol	35.21	67.92
AT3G45240.1	Thale cress	cytosol	63.57	65.66
GSMUA_Achr1P05590_001	Banana	mitochondrion	61.86	65.21
PGSC0003DMT400020938	Potato	cytosol	64.3	65.1
AT5G60550.1	Thale cress	mitochondrion	62.59	62.9
CDX80157	Canola	cytosol	62.84	62.08
CDY31536	Canola	cytosol	62.59	61.99
Bra002472.1-P	Field mustard	cytosol	62.59	61.99
CDY09195	Canola	mitochondrion	61.61	61.92
Bra020241.1-P	Field mustard	mitochondrion	61.61	61.92
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	13.2	56.84
Os03t0711300-01	Rice	cytosol	56.72	54.46
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	53.79	53.4
TraesCS1D01G451100.1	Wheat	cytosol, plastid	54.28	52.86
Zm00001d025946_P003	Maize	cytosol	54.28	52.11
Zm00001d002827_P003	Maize	cytosol	53.3	51.9
TraesCS1B01G477300.1	Wheat	cytosol	53.55	51.77
TraesCS4B01G046100.1	Wheat	cytosol	53.79	51.64
KXG37739	Sorghum	cytosol	53.3	51.17
TraesCS4A01G268200.1	Wheat	cytosol	53.3	51.17
TraesCS4D01G045900.1	Wheat	cytosol	53.3	51.17
HORVU1Hr1G094990.20	Barley	cytosol, plastid	50.37	48.7
HORVU4Hr1G007440.1	Barley	cytosol	53.06	48.55
Solyc11g069300.1.1	Tomato	cytosol	22.49	48.17
OQU82027	Sorghum	cytosol	54.28	45.4

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100789178	MapMan:18.4.5.9	MapMan:27.3.2	Gene3D:3.30.200.20	EMBL:ACUP02007190
EnsemblPlantsGene:GLYMA_12G068500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	UniProt:K7LTE7	EnsemblPlants:KRH24883	ProteinID:KRH24883	ProteinID:KRH24883.1	ProteinID:KRH24884.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023D105D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:5035854..5041778

Molecular Weight (calculated)

46008.6 Da

IEP (calculated)

4.487

GRAVY (calculated)

-0.431

Length

409 amino acids

Sequence
(BLAST)

001: MLNKTLSFAM GCCSCFGFIR TPNRQSQRSK PTTNNNLCQE PLLDDDIEDE EGEPLYNDEV TNNSGDEGAE ETRPKRSEEI LNFRVENGMI CRQFPVKETR
101: KLVRSEDENG NKMINEYIRE YKIGSGSYGK VALYRSSVDD KHYAIKAFHK SYLLKLRVAP SETAMMDVLR EVLIMKMLEH PNIVNLIEVI DDPETDNFYM
201: VLEYVEGKWI CEGSGPTCGL GEETARRYLR DIVSGLTYLH AHNIVHLDIK PDNLLITCHG TVKIGDFSVS QAFEDDKDEL RRSPGTPVFT APECILGGVK
301: YGGKAADTWA VGVTLYCMIL GEYPFLGDTL QDTYDKIVNN PLVLPNDMNP PLKNLIEGLL SKDPSLRMTL GAVAEDSWVI GDDGPIPDYL CWCKRKSLGI
401: EDNDESNTD

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.