Factsheet for TraesCS4D01G045900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G268200.1	Wheat	cytosol	99.3	99.3
TraesCS4B01G046100.1	Wheat	cytosol	98.36	98.36
HORVU4Hr1G007440.1	Barley	cytosol	96.71	92.17
Zm00001d025946_P003	Maize	cytosol	81.22	81.22
Os03t0711300-01	Rice	cytosol	80.75	80.75
Zm00001d002827_P003	Maize	cytosol	79.34	80.48
KXG37739	Sorghum	cytosol	77.23	77.23
TraesCS1D01G451100.1	Wheat	cytosol, plastid	74.88	75.95
OQU82027	Sorghum	cytosol	81.22	70.76
GSMUA_Achr1P05590_001	Banana	mitochondrion	54.46	59.79
Solyc11g069310.1.1	Tomato	cytosol	29.34	58.96
VIT_06s0004g02990.t01	Wine grape	cytosol	53.99	57.36
PGSC0003DMT400020938	Potato	cytosol	53.52	56.44
KRH26430	Soybean	cytosol	52.58	54.77
KRH22907	Soybean	cytosol	52.35	54.39
KRH24883	Soybean	cytosol, plastid	51.17	53.3
AT3G45240.1	Thale cress	cytosol	49.06	52.78
CDY31536	Canola	cytosol	50.7	52.3
Bra002472.1-P	Field mustard	cytosol	50.7	52.3
AT5G60550.1	Thale cress	mitochondrion	49.77	52.09
CDX80157	Canola	cytosol	50.23	51.69
Bra020241.1-P	Field mustard	mitochondrion	48.36	50.61
CDY09195	Canola	mitochondrion	48.36	50.61
KRH29938	Soybean	mitochondrion	50.23	49.77
Solyc11g069300.1.1	Tomato	cytosol	19.48	43.46
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	9.62	43.16

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241
PANTHER:PTHR44241:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4D01G045900	EnsemblPlants:TraesCS4D01G045900.1	TIGR:cd14008	:	:	:

Description

No Description!

Coordinates

chr4D:+:21686523..21692075

Molecular Weight (calculated)

47829.6 Da

IEP (calculated)

4.976

GRAVY (calculated)

-0.464

Length

426 amino acids

Sequence
(BLAST)

001: MADLTDMGCC SCFSFLRKPS VKVGRPRDTD GMLSKDLLKR QTSEDFDGSF YTGDDPDLSF YNGDGIDRSF FNGDDPDRSF YERDGTDYNH ESDDEPPRKR
101: SEDIILTRAQ SGFACRESLV KETKKVVRSE DDLGNKMINQ YVHLGKIGAG SYGKVVLYRN IEDGKLYAVK VLNKPHMMKV RVVRSETAMT DVIREVSLMK
201: MLSHPNIVNL IEVIDDPNSD KFYMVLEYVE GKIVWDKGIG EATCRKYLRD IISGVIYLHS HNIIHSDIKP DNLLVTSTGN VKIGDFSVSQ IFEDDDDMLR
301: RSPGTPVFTA PECCQGSAYH GRASDTWAVG VTLYCMITGR YPFLGETLQE TYDKIVNDPA DIPSNVSPQL VDLLERLLCK DPGDRITLEA AAAHPWVAGD
401: EGPVPEYMCR CGFGRRKRNG SQEAVQ

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.