CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24883	Soybean	cytosol, plastid	88.6	93.15
KRH26430	Soybean	cytosol	68.84	72.37
KRH22907	Soybean	cytosol	67.67	70.98
VIT_06s0004g02990.t01	Wine grape	cytosol	64.19	68.83
Solyc11g069310.1.1	Tomato	cytosol	33.49	67.92
GSMUA_Achr1P05590_001	Banana	mitochondrion	58.6	64.95
PGSC0003DMT400020938	Potato	cytosol	60.47	64.36
AT3G45240.1	Thale cress	cytosol	58.84	63.89
AT5G60550.1	Thale cress	mitochondrion	58.37	61.67
CDY31536	Canola	cytosol	58.14	60.53
Bra002472.1-P	Field mustard	cytosol	58.14	60.53
CDX80157	Canola	cytosol	58.14	60.39
CDY09195	Canola	mitochondrion	56.74	59.95
Bra020241.1-P	Field mustard	mitochondrion	56.74	59.95
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	13.02	58.95
Os03t0711300-01	Rice	cytosol	52.56	53.05
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	49.3	51.46
TraesCS1D01G451100.1	Wheat	cytosol, plastid	49.77	50.95
TraesCS4B01G046100.1	Wheat	cytosol	50.47	50.94
Zm00001d025946_P003	Maize	cytosol	50.47	50.94
Zm00001d002827_P003	Maize	cytosol	49.53	50.71
TraesCS1B01G477300.1	Wheat	cytosol	49.53	50.35
TraesCS4A01G268200.1	Wheat	cytosol	49.77	50.23
TraesCS4D01G045900.1	Wheat	cytosol	49.77	50.23
KXG37739	Sorghum	cytosol	49.53	50.0
HORVU4Hr1G007440.1	Barley	cytosol	49.53	47.65
Solyc11g069300.1.1	Tomato	cytosol	21.16	47.64
HORVU1Hr1G094990.20	Barley	cytosol, plastid	46.51	47.28
OQU82027	Sorghum	cytosol	50.23	44.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100816625	MapMan:18.4.5.9	MapMan:27.3.2	UniProt:A0A0R0HNB9	EMBL:ACUP02006836
EnsemblPlantsGene:GLYMA_11G147500	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KRH29938
ProteinID:KRH29938	ProteinID:KRH29938.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0003DE8B0B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:11380252..11384955

Molecular Weight (calculated)

48474.5 Da

IEP (calculated)

4.513

GRAVY (calculated)

-0.425

Length

430 amino acids

Sequence
(BLAST)

001: MLNKTLSFAM GCCSCFGFIR TPNRQSQRSK PATNNNNLCQ EPLLDDDIED EEGEHLYNDE VTNTSGDEGE EETRPKRSEE ILNLRVENDM ICTRFPVKET
101: HKLVRTEDEN GNKMINEYIR ECKIGSGSYG KVALYQSSVD GKNYAIKAFH KSHLLKLRVS PSETAMTDVL REVFQLILLP GLVLIMKMLE HPNIVDLIEV
201: IDDPQSDNFY MVLEYVEGKW ICEGSGTTCG LGEETARRYL RDIVSGLTYL HAHNIVHLDI KPDNLLITRH GTVKIGDFSV SQAFEDDKDE LRRSPGTPVF
301: TAPECILGVK YGGKAADTWA VGVTLYCMIL GEYPFLGDTL QDTYDKVRNT HSDIYDKIVN NPLVLPNDMN PPLKNLIEGL LSKDPRLRMS LSDVAEDSWV
401: IGDDGPIPDY LCWCKMKSLG IEDNDESNTD

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.