CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26430	Soybean	cytosol	95.12	95.35
KRH24883	Soybean	cytosol, plastid	71.95	72.13
VIT_06s0004g02990.t01	Wine grape	cytosol	69.02	70.57
Solyc11g069310.1.1	Tomato	cytosol	35.85	69.34
KRH29938	Soybean	mitochondrion	70.98	67.67
PGSC0003DMT400020938	Potato	cytosol	65.12	66.09
GSMUA_Achr1P05590_001	Banana	mitochondrion	62.44	65.98
AT3G45240.1	Thale cress	cytosol	62.68	64.9
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	14.63	63.16
AT5G60550.1	Thale cress	mitochondrion	61.95	62.41
CDY09195	Canola	mitochondrion	61.22	61.67
Bra020241.1-P	Field mustard	mitochondrion	61.22	61.67
CDX80157	Canola	cytosol	61.95	61.35
CDY31536	Canola	cytosol	61.71	61.26
Bra002472.1-P	Field mustard	cytosol	61.71	61.26
Os03t0711300-01	Rice	cytosol	56.83	54.69
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	53.9	53.64
Zm00001d002827_P003	Maize	cytosol	54.39	53.1
TraesCS1D01G451100.1	Wheat	cytosol, plastid	54.15	52.86
TraesCS4B01G046100.1	Wheat	cytosol	54.88	52.82
Zm00001d025946_P003	Maize	cytosol	54.88	52.82
KXG37739	Sorghum	cytosol	54.88	52.82
TraesCS4D01G045900.1	Wheat	cytosol	54.39	52.35
TraesCS4A01G268200.1	Wheat	cytosol	54.15	52.11
TraesCS1B01G477300.1	Wheat	cytosol	53.17	51.54
HORVU4Hr1G007440.1	Barley	cytosol	53.66	49.22
Solyc11g069300.1.1	Tomato	cytosol	22.68	48.69
HORVU1Hr1G094990.20	Barley	cytosol, plastid	50.0	48.46
OQU82027	Sorghum	cytosol	55.12	46.22

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100807940	MapMan:18.4.5.9	MapMan:27.3.2	Gene3D:3.30.200.20	EMBL:ACUP02008440
EMBL:ACUP02008441	EnsemblPlantsGene:GLYMA_13G326900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107	GO:GO:0019538
GO:GO:0035556	UniProt:I1M4L5	InterPro:IPR000719	EnsemblPlants:KRH22907	ProteinID:KRH22907	ProteinID:KRH22907.1
ProteinID:KRH22908.1	ProteinID:KRH22909.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233AC74	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:42179066..42185980

Molecular Weight (calculated)

45872.6 Da

IEP (calculated)

4.957

GRAVY (calculated)

-0.371

Length

410 amino acids

Sequence
(BLAST)

001: MGDYKSFSFS KMMGCCGCFG FVQKPRRRRR DKRGISNLLS QGLLLDGETE GDETYSGDVT SNCTSVDDNE VQAVRNRSED ILNFRAKNGM VCRPFPVKET
101: CKLDRSEDEN GNKMINGYVR EYKIGSGSYG KVALYRSSVD GKHYAIKSFH KSQLQKLRVA PSETAMTDVL REVLIMKMVE HPNIVNLIEV IDDPESDDFY
201: MVLEYVESKW VCEGTGRPCA LGEETARKYL RDIVSGLTYL HAHNIVHGDI KPDNLLITHH GTVKIGDFSV SQAFEDGNDE LRRSPGTPVF TAPECCLGLT
301: YHGKASDTWA VGVTLYCMIL GEYPFLGDTL QDTYDKIVND PLVLPDDINP QLKNLIEGLL CKDPELRMTL GDVAEHIWVI GEDGPIPGYL CWCKRKSMVT
401: EDSDGSDILA

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.