CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22907	Soybean	cytosol	95.35	95.12
KRH24883	Soybean	cytosol, plastid	72.86	72.86
VIT_06s0004g02990.t01	Wine grape	cytosol	69.68	71.07
Solyc11g069310.1.1	Tomato	cytosol	35.94	69.34
KRH29938	Soybean	mitochondrion	72.37	68.84
GSMUA_Achr1P05590_001	Banana	mitochondrion	62.59	65.98
PGSC0003DMT400020938	Potato	cytosol	65.04	65.84
AT3G45240.1	Thale cress	cytosol	63.08	65.15
AT5G60550.1	Thale cress	mitochondrion	61.61	61.92
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	14.18	61.05
CDY09195	Canola	mitochondrion	60.64	60.93
Bra020241.1-P	Field mustard	mitochondrion	60.64	60.93
CDY31536	Canola	cytosol	61.37	60.77
Bra002472.1-P	Field mustard	cytosol	61.37	60.77
CDX80157	Canola	cytosol	61.37	60.63
Os03t0711300-01	Rice	cytosol	56.97	54.69
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	53.79	53.4
Zm00001d002827_P003	Maize	cytosol	54.52	53.1
TraesCS4B01G046100.1	Wheat	cytosol	55.26	53.05
TraesCS1D01G451100.1	Wheat	cytosol, plastid	54.03	52.62
TraesCS4D01G045900.1	Wheat	cytosol	54.77	52.58
Zm00001d025946_P003	Maize	cytosol	54.77	52.58
TraesCS4A01G268200.1	Wheat	cytosol	54.52	52.35
KXG37739	Sorghum	cytosol	54.52	52.35
TraesCS1B01G477300.1	Wheat	cytosol	53.06	51.3
HORVU4Hr1G007440.1	Barley	cytosol	54.03	49.44
Solyc11g069300.1.1	Tomato	cytosol	22.74	48.69
HORVU1Hr1G094990.20	Barley	cytosol, plastid	49.63	47.99
OQU82027	Sorghum	cytosol	54.77	45.81

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100776013	MapMan:18.4.5.9	MapMan:27.3.2	Gene3D:3.30.200.20	EMBL:ACUP02007714
EnsemblPlantsGene:GLYMA_12G173600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107	GO:GO:0019538	GO:GO:0035556
UniProt:I1LTJ1	InterPro:IPR000719	EnsemblPlants:KRH26430	ProteinID:KRH26430	ProteinID:KRH26430.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233D46F	SEG:seg

Description

hypothetical protein

Coordinates

chr12:-:33039481..33046083

Molecular Weight (calculated)

45757.4 Da

IEP (calculated)

4.737

GRAVY (calculated)

-0.364

Length

409 amino acids

Sequence
(BLAST)

001: MGDYKSFSFS KMMGCCGCFG FVQKPRPRRA KRSISNLLSQ GLLLDGETEG EETYSGDVTS NCTSGDDNEV QAVRNRSEDI LNFRAENGMV CRPFPVKETC
101: KLDRSEDENG NKMINEYVRE YKIGCGSYGK VALYRSSVDG KHYAIKSFHK SHLQKLRVAP SETAMTDVLR EVLIMKMVEH PNIVNLIEVI DDPESDDFYM
201: VLEYVESKWV CEGTGHPCAL GEETARKYLR DIVSGLTYLH AHNIVHGDIK PDNLLITRHG TVKIGDFSVS QAFEDGNDEL RRSPGTPVFT APECCLGLTY
301: HGKASDTWAV GVTLYCMILG EYPFLGDTLQ DTYDKIVNDP LVLPEDINPQ LKNLIEGLLC KDPELRMTLG DVAEHIWVIG DDGPIPGYLC WCKRKSMVTE
401: DSDGSDILD

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.