Factsheet for TraesCS4B01G046100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G045900.1	Wheat	cytosol	98.36	98.36
TraesCS4A01G268200.1	Wheat	cytosol	98.12	98.12
HORVU4Hr1G007440.1	Barley	cytosol	95.77	91.28
Zm00001d025946_P003	Maize	cytosol	80.99	80.99
Os03t0711300-01	Rice	cytosol	80.52	80.52
Zm00001d002827_P003	Maize	cytosol	78.87	80.0
KXG37739	Sorghum	cytosol	77.0	77.0
TraesCS1B01G477300.1	Wheat	cytosol	74.65	75.18
OQU82027	Sorghum	cytosol	81.22	70.76
Solyc11g069310.1.1	Tomato	cytosol	30.28	60.85
GSMUA_Achr1P05590_001	Banana	mitochondrion	54.69	60.05
PGSC0003DMT400020938	Potato	cytosol	54.46	57.43
VIT_06s0004g02990.t01	Wine grape	cytosol	53.05	56.36
KRH26430	Soybean	cytosol	53.05	55.26
KRH22907	Soybean	cytosol	52.82	54.88
KRH24883	Soybean	cytosol, plastid	51.64	53.79
AT3G45240.1	Thale cress	cytosol	49.53	53.28
CDY31536	Canola	cytosol	51.41	53.03
Bra002472.1-P	Field mustard	cytosol	51.41	53.03
AT5G60550.1	Thale cress	mitochondrion	50.47	52.83
CDX80157	Canola	cytosol	50.94	52.42
Bra020241.1-P	Field mustard	mitochondrion	49.06	51.35
CDY09195	Canola	mitochondrion	49.06	51.35
KRH29938	Soybean	mitochondrion	50.94	50.47
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	9.86	44.21
Solyc11g069300.1.1	Tomato	cytosol	19.48	43.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241
PANTHER:PTHR44241:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS4B01G046100	EnsemblPlants:TraesCS4B01G046100.1	TIGR:cd14008	:	:	:

Description

No Description!

Coordinates

chr4B:-:33065739..33071378

Molecular Weight (calculated)

48062.0 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.480

Length

426 amino acids

Sequence
(BLAST)

001: MADLTDMGCC SCFSFLRKPS VKVGRPRDTD RMLSKDLLKR QTSEDFDGSF YTGDDPDLSF YNGDGIDRSF FNGDDPDRSF YERDGTDYNH ESDDEPPRKR
101: SEDIILTRAQ SGFACRESLV KETKKVVRSE DDLGNKMINQ YVHLGKIGAG SYGKVVLYRN IEDGKLYAVK VLNKPHMMKV RVVRSETAMT DVIREVSLMK
201: MLSHPNIVNL IEVIDDPNSD KFYMVLEYVE GKIVWDKGLG EATCRKYLRD IISGVMYLHS HNIIHSDIKP DNLLVTSTGN VKIGDFSVSQ IFEDDDDMLR
301: RSPGTPVFTA PECCQGSAYH GRASDTWAVG VTLYCMITGR YPFLGETLQE TYDKIVNDPA DIPSDVSPLL VDLLERLLCK DPRDRITLEA TAAHPWVAGD
401: EGPVPEYMCR CGFGRRKRNG SQEAVQ

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.