Factsheet for AT3G45240.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G60550.1	Thale cress	mitochondrion	77.27	75.18
Solyc11g069310.1.1	Tomato	cytosol	34.85	65.09
VIT_06s0004g02990.t01	Wine grape	cytosol	65.4	64.59
KRH24883	Soybean	cytosol, plastid	65.66	63.57
KRH26430	Soybean	cytosol	65.15	63.08
KRH22907	Soybean	cytosol	64.9	62.68
GSMUA_Achr1P05590_001	Banana	mitochondrion	61.11	62.37
PGSC0003DMT400020938	Potato	cytosol	62.88	61.63
KRH29938	Soybean	mitochondrion	63.89	58.84
Os03t0711300-01	Rice	cytosol	56.06	52.11
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	12.37	51.58
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	52.78	50.73
TraesCS1D01G451100.1	Wheat	cytosol, plastid	53.03	50.0
Zm00001d025946_P003	Maize	cytosol	53.79	50.0
Zm00001d002827_P003	Maize	cytosol	52.78	49.76
TraesCS4A01G268200.1	Wheat	cytosol	53.28	49.53
TraesCS4B01G046100.1	Wheat	cytosol	53.28	49.53
TraesCS4D01G045900.1	Wheat	cytosol	52.78	49.06
KXG37739	Sorghum	cytosol	52.53	48.83
TraesCS1B01G477300.1	Wheat	cytosol	51.77	48.46
HORVU4Hr1G007440.1	Barley	cytosol	53.28	47.2
HORVU1Hr1G094990.20	Barley	cytosol, plastid	48.99	45.86
Solyc11g069300.1.1	Tomato	cytosol	21.97	45.55
OQU82027	Sorghum	cytosol	54.04	43.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	EntrezGene:823660	ProteinID:AEE78007.1	ProteinID:AEE78008.1
EMBL:AL132953	EMBL:AM489731	ArrayExpress:AT3G45240	EnsemblPlantsGene:AT3G45240	RefSeq:AT3G45240	TAIR:AT3G45240
RefSeq:AT3G45240-TAIR-G	EnsemblPlants:AT3G45240.1	TAIR:AT3G45240.1	EMBL:AY035070	EMBL:AY056309	Unigene:At.21488
ProteinID:CAB72162.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009615	GO:GO:0009987
GO:GO:0016032	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107
GO:GO:0019538	GO:GO:0035556	GO:GO:0046777	Symbol:GRIK1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_001030811.1	RefSeq:NP_566876.3	PFAM:PF00069	PIRSF:PIRSF000654	PO:PO:0000084	PO:PO:0000293
PO:PO:0001016	PO:PO:0001017	PO:PO:0025195	PO:PO:0025281	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR44241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q93V58	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00000A47F0	SEG:seg	:	:

Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]

Coordinates

chr3:-:16570478..16573740

Molecular Weight (calculated)

44575.3 Da

IEP (calculated)

4.606

GRAVY (calculated)

-0.530

Length

396 amino acids

Sequence
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.