Factsheet for Zm00001d025946_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002827_P003	Maize	cytosol	91.78	93.1
OQU82027	Sorghum	cytosol	97.18	84.66
Os03t0711300-01	Rice	cytosol	84.51	84.51
TraesCS4D01G045900.1	Wheat	cytosol	81.22	81.22
TraesCS4B01G046100.1	Wheat	cytosol	80.99	80.99
TraesCS4A01G268200.1	Wheat	cytosol	80.99	80.99
HORVU4Hr1G007440.1	Barley	cytosol	80.75	76.96
TraesCS1D01G451100.1	Wheat	cytosol, plastid	73.0	74.05
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	71.6	74.03
TraesCS1B01G477300.1	Wheat	cytosol	73.24	73.76
HORVU1Hr1G094990.20	Barley	cytosol, plastid	62.21	62.65
Solyc11g069310.1.1	Tomato	cytosol	30.52	61.32
GSMUA_Achr1P05590_001	Banana	mitochondrion	55.4	60.82
PGSC0003DMT400020938	Potato	cytosol	54.69	57.67
VIT_06s0004g02990.t01	Wine grape	cytosol	54.23	57.61
KRH22907	Soybean	cytosol	52.82	54.88
KRH26430	Soybean	cytosol	52.58	54.77
KRH24883	Soybean	cytosol, plastid	52.11	54.28
AT5G60550.1	Thale cress	mitochondrion	51.41	53.81
AT3G45240.1	Thale cress	cytosol	50.0	53.79
CDY31536	Canola	cytosol	51.88	53.51
Bra002472.1-P	Field mustard	cytosol	51.88	53.51
CDX80157	Canola	cytosol	51.88	53.38
CDY09195	Canola	mitochondrion	49.3	51.6
Bra020241.1-P	Field mustard	mitochondrion	49.3	51.6
KRH29938	Soybean	mitochondrion	50.94	50.47
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	10.09	45.26
Solyc11g069300.1.1	Tomato	cytosol	19.48	43.46

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100216619	MapMan:18.4.5.9	MapMan:27.3.2	ProteinID:AQK45081.1	ProteinID:AQK45082.1
ProteinID:AQK45085.1	ProteinID:AQK45086.1	UniProt:B4FIX4	EMBL:BT037062	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241	PANTHER:PTHR44241:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00017B7136	EnsemblPlantsGene:Zm00001d025946	EnsemblPlants:Zm00001d025946_P003
EnsemblPlants:Zm00001d025946_T003	SEG:seg	:	:	:	:

Description

Serine/threonine-protein kinase GRIK1

Coordinates

chr10:+:134457486..134477101

Molecular Weight (calculated)

47873.4 Da

IEP (calculated)

4.540

GRAVY (calculated)

-0.487

Length

426 amino acids

Sequence
(BLAST)

001: MADLTDIGCC SCFSFLRKPS VPVRQHQDAD GMLSEDLLKR QSAEDPDGSF YTGDDPDVSF YNGDDLDRSF YNGDDPDRSF YDRDDTDYIE GSDDGPPRKS
101: SEDIVQLRTQ NGFACREISV KETKKVFRSE DENGNKMVNQ YVHLGKIGSG SYGKVVLYRN IKDGKLYAIK VLNKPYMMKV RVVRTETAMT DVLREVSIMK
201: MLNHPNIVNL VEVIDDPNID KFYMVLDYVE GKMVCDNGLE EGTARNYLRD IISGLMYLHS HNVIHGDIKP DNLLVTSAGN VKIGDFSVSQ VFEDDDDMLW
301: RSPGTPVFTA PECCQGSAYH GRASDTWAVG VTLYCMVSGH YPFLGDTLQE TYDKIANDPV QIPGDMNPQL ADLLLRLLCK DPGDRITLQA AAEHPWVAGD
401: EGPVPEFICR CGFGRRKRND VREEVQ

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.