Factsheet for TraesCS1D01G451100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	95.71	97.57
TraesCS1B01G477300.1	Wheat	cytosol	95.48	94.8
HORVU1Hr1G094990.20	Barley	cytosol, plastid	75.95	75.41
TraesCS4D01G045900.1	Wheat	cytosol	75.95	74.88
Os03t0711300-01	Rice	cytosol	75.71	74.65
Zm00001d025946_P003	Maize	cytosol	74.05	73.0
Zm00001d002827_P003	Maize	cytosol	72.62	72.62
KXG37739	Sorghum	cytosol	71.9	70.89
OQU82027	Sorghum	cytosol	74.76	64.21
Solyc11g069310.1.1	Tomato	cytosol	30.48	60.38
GSMUA_Achr1P05590_001	Banana	mitochondrion	55.24	59.79
VIT_06s0004g02990.t01	Wine grape	cytosol	54.76	57.36
PGSC0003DMT400020938	Potato	cytosol	53.1	55.2
KRH24883	Soybean	cytosol, plastid	52.86	54.28
KRH22907	Soybean	cytosol	52.86	54.15
KRH26430	Soybean	cytosol	52.62	54.03
AT5G60550.1	Thale cress	mitochondrion	51.9	53.56
AT3G45240.1	Thale cress	cytosol	50.0	53.03
CDY31536	Canola	cytosol	51.9	52.78
Bra002472.1-P	Field mustard	cytosol	51.9	52.78
CDX80157	Canola	cytosol	51.67	52.42
CDY09195	Canola	mitochondrion	50.71	52.33
Bra020241.1-P	Field mustard	mitochondrion	50.71	52.33
KRH29938	Soybean	mitochondrion	50.95	49.77
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	9.52	42.11
Solyc11g069300.1.1	Tomato	cytosol	17.62	38.74

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS1D01G451100	EnsemblPlants:TraesCS1D01G451100.1	TIGR:cd14008	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:+:493478644..493483113

Molecular Weight (calculated)

46905.6 Da

IEP (calculated)

5.333

GRAVY (calculated)

-0.431

Length

420 amino acids

Sequence
(BLAST)

001: MAGCCCFSCF GFLRKLHHRP AAGDSDGAPS KDLLLPLPRS SDDGSFYAGD DPDNSSSFLG DESRSFYERE EEDYLLRQSD GDGDDEPPRK RSEDIILSRA
101: RNGFACRDSL VRDTRKLFRS EDETTGCKMI NQYVHLGKIG AGSYGKVVKY RNIKDGRLYA IKVLSKHYML KVRVVRSETA MTDVLREVSL MKMLDHPNIV
201: NLIEVIDDPN TDKFYMVLEY VEGKMVCDNG IGLGEATSRK YLRDIVSGVM YLHSHNIIHG DIKPDNLLVT STGNVKIGDF SVSQIFEDDD DMLWRSPGTP
301: VFTAPECCQG SAYHGRTADT WAVGVTLYCM ITGKYPFLGE TLQETYDKIA NDPVEIPGDT SPQLADLMQR LLYKDPGHRM TLQAVAAHPW VAGAEGPVPE
401: FVCRCGFGRR NRSDSQEAVQ

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.