Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80157 | Canola | cytosol | 88.45 | 86.96 |
| Bra002472.1-P | Field mustard | cytosol | 88.21 | 86.92 |
| CDY31536 | Canola | cytosol | 88.21 | 86.92 |
| Bra020241.1-P | Field mustard | mitochondrion | 84.03 | 84.03 |
| CDY09195 | Canola | mitochondrion | 84.03 | 84.03 |
| AT3G45240.1 | Thale cress | cytosol | 75.18 | 77.27 |
| Solyc11g069310.1.1 | Tomato | cytosol | 34.89 | 66.98 |
| VIT_06s0004g02990.t01 | Wine grape | cytosol | 64.37 | 65.34 |
| GSMUA_Achr1P05590_001 | Banana | mitochondrion | 61.92 | 64.95 |
| PGSC0003DMT400020938 | Potato | cytosol | 63.15 | 63.61 |
| KRH24883 | Soybean | cytosol, plastid | 62.9 | 62.59 |
| KRH22907 | Soybean | cytosol | 62.41 | 61.95 |
| KRH26430 | Soybean | cytosol | 61.92 | 61.61 |
| KRH29938 | Soybean | mitochondrion | 61.67 | 58.37 |
| PGSC0003DMT400074993 | Potato | cytosol, nucleus, plastid | 13.02 | 55.79 |
| Os03t0711300-01 | Rice | cytosol | 56.27 | 53.76 |
| TraesCS1A01G443100.1 | Wheat | cytosol, plasma membrane, plastid | 52.58 | 51.94 |
| TraesCS1D01G451100.1 | Wheat | cytosol, plastid | 53.56 | 51.9 |
| Zm00001d025946_P003 | Maize | cytosol | 53.81 | 51.41 |
| Zm00001d002827_P003 | Maize | cytosol | 52.33 | 50.71 |
| KXG37739 | Sorghum | cytosol | 52.83 | 50.47 |
| TraesCS4B01G046100.1 | Wheat | cytosol | 52.83 | 50.47 |
| TraesCS1B01G477300.1 | Wheat | cytosol | 52.33 | 50.35 |
| TraesCS4A01G268200.1 | Wheat | cytosol | 52.33 | 50.0 |
| TraesCS4D01G045900.1 | Wheat | cytosol | 52.09 | 49.77 |
| HORVU1Hr1G094990.20 | Barley | cytosol, plastid | 49.88 | 47.99 |
| HORVU4Hr1G007440.1 | Barley | cytosol | 52.09 | 47.43 |
| Solyc11g069300.1.1 | Tomato | cytosol | 21.38 | 45.55 |
| OQU82027 | Sorghum | cytosol | 54.05 | 44.99 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.9 | MapMan:27.3.2 | EntrezGene:836176 | UniProt:A0A178UN27 | ProteinID:AED97343.1 |
| EMBL:AM489730 | ArrayExpress:AT5G60550 | EnsemblPlantsGene:AT5G60550 | RefSeq:AT5G60550 | TAIR:AT5G60550 | RefSeq:AT5G60550-TAIR-G |
| EnsemblPlants:AT5G60550.1 | TAIR:AT5G60550.1 | EMBL:AY099846 | Unigene:At.29153 | ProteinID:BAB08238.1 | EMBL:BT020486 |
| EMBL:BT025976 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009987 | GO:GO:0016032 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0018105 | GO:GO:0018107 | GO:GO:0019538 | GO:GO:0035556 |
| Symbol:GRIK2 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_200863.2 | ProteinID:OAO94474.1 | PFAM:PF00069 |
| PO:PO:0000084 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR44241 | PANTHER:PTHR44241:SF1 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| UniProt:Q5HZ38 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00001628E4 | SEG:seg |
Description
GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
Coordinates
chr5:+:24339229..24342590
Molecular Weight (calculated)
45654.9 Da
IEP (calculated)
4.696
GRAVY (calculated)
-0.419
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.