Factsheet for HORVU4Hr1G007440.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G045900.1	Wheat	cytosol	92.17	96.71
TraesCS4A01G268200.1	Wheat	cytosol	91.95	96.48
TraesCS4B01G046100.1	Wheat	cytosol	91.28	95.77
Zm00001d025946_P003	Maize	cytosol	76.96	80.75
Os03t0711300-01	Rice	cytosol	76.51	80.28
Zm00001d002827_P003	Maize	cytosol	75.17	80.0
KXG37739	Sorghum	cytosol	73.38	77.0
OQU82027	Sorghum	cytosol	76.96	70.35
HORVU1Hr1G094990.20	Barley	cytosol, plastid	60.4	63.83
GSMUA_Achr1P05590_001	Banana	mitochondrion	52.13	60.05
Solyc11g069310.1.1	Tomato	cytosol	28.19	59.43
PGSC0003DMT400020938	Potato	cytosol	51.68	57.18
VIT_06s0004g02990.t01	Wine grape	cytosol	51.01	56.86
KRH26430	Soybean	cytosol	49.44	54.03
KRH22907	Soybean	cytosol	49.22	53.66
AT3G45240.1	Thale cress	cytosol	47.2	53.28
KRH24883	Soybean	cytosol, plastid	48.55	53.06
AT5G60550.1	Thale cress	mitochondrion	47.43	52.09
CDY31536	Canola	cytosol	48.1	52.06
Bra002472.1-P	Field mustard	cytosol	48.1	52.06
CDX80157	Canola	cytosol	47.65	51.45
CDY09195	Canola	mitochondrion	45.86	50.37
Bra020241.1-P	Field mustard	mitochondrion	45.86	50.37
KRH29938	Soybean	mitochondrion	47.65	49.53
Solyc11g069300.1.1	Tomato	cytosol	18.79	43.98
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	8.95	42.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	UniProt:A0A287N377	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G007440	EnsemblPlants:HORVU4Hr1G007440.1	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241	PANTHER:PTHR44241:SF1	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B47F93D	SEG:seg

Description

No Description!

Coordinates

chrchr4H:-:19487043..19493715

Molecular Weight (calculated)

49590.7 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.419

Length

447 amino acids

Sequence
(BLAST)

001: XXXXTAPEDT RGFPVRGSLW MADLTDMGCC SCFSFLRKPS VKVCQPRYTD GMLSKDLLKR QSSEDFDGSF YTGDDPDMSF YNGDGLDRSF FNNGDDPDRS
101: FYERDGTDYN HESDDEPPRK RSEDIILTRA QSGFACRESL VKETKKVVRS EDDLGNKMIN QYVHLGKIGA GSYGKVVLYR NIEDGKLYAV KVLNKPHMMK
201: VRVVRSETAM TDVIREVSLM KMLSHPNIVN LIEVIDDPNS DKFYMVLEYV EGKIVWDKGL GEATCRKYLR DIISGVIYLH SHNIIHSDIK PDNLLVTSTG
301: NVKIGDFSVS QIFEDDDDML RRSPGTPVFT APECCQGSAY HGRSADTWAV GVTLYCMITG CYPFLGETLQ ETYDKIVNDA ADIPSAVSPQ LVDLLERLLC
401: KDPGDRITLE AAAAHPWVAG DEGPVPEYMC RCGFGRRNRN GSQAAVQ

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.