CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020241.1-P	Field mustard	mitochondrion	100.0	100.0
CDX80157	Canola	cytosol	85.5	84.06
AT5G60550.1	Thale cress	mitochondrion	84.03	84.03
CDY31536	Canola	cytosol	85.26	84.02
Solyc11g069310.1.1	Tomato	cytosol	34.15	65.57
GSMUA_Achr1P05590_001	Banana	mitochondrion	61.43	64.43
VIT_06s0004g02990.t01	Wine grape	cytosol	61.92	62.84
KRH24883	Soybean	cytosol, plastid	61.92	61.61
KRH22907	Soybean	cytosol	61.67	61.22
PGSC0003DMT400020938	Potato	cytosol	60.69	61.14
KRH26430	Soybean	cytosol	60.93	60.64
KRH29938	Soybean	mitochondrion	59.95	56.74
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	12.78	54.74
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	51.35	50.73
TraesCS1D01G451100.1	Wheat	cytosol, plastid	52.33	50.71
Os03t0711300-01	Rice	cytosol	53.07	50.7
Zm00001d002827_P003	Maize	cytosol	51.11	49.52
Zm00001d025946_P003	Maize	cytosol	51.6	49.3
TraesCS4B01G046100.1	Wheat	cytosol	51.35	49.06
TraesCS1B01G477300.1	Wheat	cytosol	50.86	48.94
KXG37739	Sorghum	cytosol	51.11	48.83
TraesCS4A01G268200.1	Wheat	cytosol	50.86	48.59
TraesCS4D01G045900.1	Wheat	cytosol	50.61	48.36
HORVU1Hr1G094990.20	Barley	cytosol, plastid	47.91	46.1
HORVU4Hr1G007440.1	Barley	cytosol	50.37	45.86
Solyc11g069300.1.1	Tomato	cytosol	20.88	44.5
OQU82027	Sorghum	cytosol	51.84	43.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	Gene3D:3.30.200.20	GO:A0A078F3X8	UniProt:A0A078F3X8
EnsemblPlants:CDY09195	ProteinID:CDY09195	ProteinID:CDY09195.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00001439001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254357C	SEG:seg	:	:

Description

BnaA02g06210DBnaA02g06210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3X8]

Coordinates

chrLK031993:-:686291..689174

Molecular Weight (calculated)

45859.5 Da

IEP (calculated)

4.970

GRAVY (calculated)

-0.387

Length

407 amino acids

Sequence
(BLAST)

001: MFRDSLWFSR TIGCFGCFGT STRTRELPPE RPLQHDDTHS SGSEATSSSR SEEDEEEVEQ KSRSKRSDEI LKFRLDHGLI CRQVPVKVTN QLIRGEDEDG
101: NKMINEYVRV CKIGSGSYGK VVLYRSSVDG LSYAIKAFHK SQLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYIDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVAGLMYLH AHNVIHGDIK PDNLMVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYYMI LGQYPFLADT LQDTYDKIVN NPLILPDGLD PLLRDLMEGL LCKNPSERMT LKKVSEHPWF LGEDGHVPEY FCCCKRKSAL KIEQEEEANG
401: MSEDSDF

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.