CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002472.1-P	Field mustard	cytosol	99.76	99.76
CDX80157	Canola	cytosol	98.55	98.31
AT5G60550.1	Thale cress	mitochondrion	86.92	88.21
CDY09195	Canola	mitochondrion	84.02	85.26
GSMUA_Achr1P05590_001	Banana	mitochondrion	61.02	64.95
Solyc11g069310.1.1	Tomato	cytosol	33.17	64.62
VIT_06s0004g02990.t01	Wine grape	cytosol	62.47	64.34
KRH24883	Soybean	cytosol, plastid	61.99	62.59
PGSC0003DMT400020938	Potato	cytosol	60.77	62.13
KRH22907	Soybean	cytosol	61.26	61.71
KRH26430	Soybean	cytosol	60.77	61.37
KRH29938	Soybean	mitochondrion	60.53	58.14
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	12.35	53.68
Os03t0711300-01	Rice	cytosol	55.21	53.52
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	52.06	52.18
TraesCS1D01G451100.1	Wheat	cytosol, plastid	52.78	51.9
Zm00001d025946_P003	Maize	cytosol	53.51	51.88
Zm00001d002827_P003	Maize	cytosol	52.54	51.67
TraesCS4B01G046100.1	Wheat	cytosol	53.03	51.41
TraesCS4A01G268200.1	Wheat	cytosol	52.3	50.7
TraesCS4D01G045900.1	Wheat	cytosol	52.3	50.7
KXG37739	Sorghum	cytosol	52.06	50.47
TraesCS1B01G477300.1	Wheat	cytosol	51.57	50.35
HORVU4Hr1G007440.1	Barley	cytosol	52.06	48.1
Solyc11g069300.1.1	Tomato	cytosol	22.03	47.64
HORVU1Hr1G094990.20	Barley	cytosol, plastid	48.67	47.52
OQU82027	Sorghum	cytosol	53.75	45.4

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	GO:A0A078H1B1	UniProt:A0A078H1B1	EnsemblPlants:CDY31536
ProteinID:CDY31536	ProteinID:CDY31536.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00047851001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE8E30	SEG:seg	:	:	:	:

Description

BnaA10g13350DBnaA10g13350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1B1]

Coordinates

chrLK032274:-:145002..147388

Molecular Weight (calculated)

46538.0 Da

IEP (calculated)

4.570

GRAVY (calculated)

-0.409

Length

413 amino acids

Sequence
(BLAST)

001: MFRDNFLFAR TMGCFGCFGT SSTRTRQSPE PYDDDAYSYS CDSDVTSIVR GEDEEDDEEV EQKSRSQRSE EILKYRLDNG LICRQVPVKE TNELIRGEDE
101: DGNKMINEYV RVCKIGAGSY GKVVLYRSTV DGKDYAIKAF HKSHLIRLRV APSETAMSDV LREVMIMKIL EHPNIVNLIE VIDDPETDHF YMVLEYIDGK
201: WVYDGSGPPG ALGEKTARKY LRDIVAGLMY LHAHNVIHGD IKPDNLLVTS SGTVKIGDFS VSQVFKDDDD QLRRSPGTPV FTAPECCLVS GVTYSGRAAD
301: TWAVGVTLYH MILGQYPFLA DTLQDTYDKI VNNPLTIPDG LNPLLRDLIE GLLCKNPSER MTLKNVLEHP WVMEEEGHVP EYICCCKRRN SALKIEQEEE
401: EEANGISNIS DAS

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.