CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0711300-01	Rice	cytosol	80.75	80.75
TraesCS4A01G268200.1	Wheat	cytosol	77.46	77.46
TraesCS4D01G045900.1	Wheat	cytosol	77.23	77.23
TraesCS4B01G046100.1	Wheat	cytosol	77.0	77.0
OQU82027	Sorghum	cytosol	87.79	76.48
HORVU4Hr1G007440.1	Barley	cytosol	77.0	73.38
TraesCS1D01G451100.1	Wheat	cytosol, plastid	70.89	71.9
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	69.25	71.6
TraesCS1B01G477300.1	Wheat	cytosol	70.42	70.92
GSMUA_Achr1P05590_001	Banana	mitochondrion	55.87	61.34
HORVU1Hr1G094990.20	Barley	cytosol, plastid	60.09	60.52
Solyc11g069310.1.1	Tomato	cytosol	29.58	59.43
PGSC0003DMT400020938	Potato	cytosol	54.23	57.18
VIT_06s0004g02990.t01	Wine grape	cytosol	53.05	56.36
KRH22907	Soybean	cytosol	52.82	54.88
KRH26430	Soybean	cytosol	52.35	54.52
KRH24883	Soybean	cytosol, plastid	51.17	53.3
AT5G60550.1	Thale cress	mitochondrion	50.47	52.83
AT3G45240.1	Thale cress	cytosol	48.83	52.53
CDY31536	Canola	cytosol	50.47	52.06
Bra002472.1-P	Field mustard	cytosol	50.47	52.06
CDX80157	Canola	cytosol	50.47	51.93
CDY09195	Canola	mitochondrion	48.83	51.11
Bra020241.1-P	Field mustard	mitochondrion	48.83	51.11
KRH29938	Soybean	mitochondrion	50.0	49.53
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	9.86	44.21
Solyc11g069300.1.1	Tomato	cytosol	19.72	43.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	UniProt:A0A1B6QIJ9	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	EnsemblPlants:KXG37739	ProteinID:KXG37739	ProteinID:KXG37739.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241	PANTHER:PTHR44241:SF1
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G117900	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00081AD9E2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:9169675..9178422

Molecular Weight (calculated)

47579.8 Da

IEP (calculated)

4.440

GRAVY (calculated)

-0.475

Length

426 amino acids

Sequence
(BLAST)

001: MADLTNIGCC GCFSFLRKPS VPARQPPDAD VMLSQDLLED QSAEDPDGSF YTGDDPDLSF YNGNNLDTSF LNGDDPDKSF YDRDDNDYLD ESDTGPPMKS
101: SEDIIQSRAQ NGFACREVPV KEANKVFRSE DENCNKMVNQ YVHLGKIGSG SYGKVVLYRN VKDGKLYAVK VLNKPYMLKV HVVRSETAMT DVLREVSIMK
201: MLNHPNIVNL VEVIDDPNVD KFYMVLEYVE GKIVCDNGLE EATARNYVRD IISGLQYLHS HNVIHGDIKP DNLLVTSSGN VKIGDFSVSQ VFEDEDDMLW
301: RSPGTPVFTA PECCQGSAYH GRTSDTWAVG VTLYCMISGH YPFLGDTLPE TYDKITNDPV QIPDDMNPQL ADLLQRLLCK DPGERITLQT AAEHPWVAGD
401: KGPVPEHICR CGFGRWKRSD TGNQVQ

Best Arabidopsis Sequence Match ( AT5G60550.1 )
(BLAST)

001: MFRDSFLFAR TIGCFGCFGS SGSRNQQSPK PYDDDTHSCD SDVTSTARGE EEEDEEEVEQ KSRSKRSEEI LKYRLDNGLI CRHIPVRETN ELIRGEDENG
101: DKTINEYVRV CKIGSGSYGK VVLYRSTLDG QYYAIKAFHK SHLLRLRVAP SETAMSDVLR EVMIMKILEH PNIVNLIEVI DDPETDHFYM VLEYVDGKWV
201: YDGSGPPGAL GEKTARKYLR DIVTGLMYLH AHDVIHGDIK PDNLLVTSSG TVKIGDFSVS QVFKDDDDQL RRSPGTPVFT APECCLVSGI TYSGRAADTW
301: AVGVTLYCMI LGQYPFLADT LQDTYDKIVN NPLIIPDGLN PLLRDLIEGL LCKDPSQRMT LKNVSEHPWV IGEDGHVPEY FCWCKRNAAS KIEEGEANGI
401: SETSDPN

Arabidopsis Description

GRIK2Serine/threonine-protein kinase GRIK2 [Source:UniProtKB/Swiss-Prot;Acc:Q5HZ38]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.