CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025946_P003	Maize	cytosol	84.66	97.18
KXG37739	Sorghum	cytosol	76.48	87.79
Os03t0711300-01	Rice	cytosol	74.03	84.98
TraesCS4D01G045900.1	Wheat	cytosol	70.76	81.22
TraesCS4B01G046100.1	Wheat	cytosol	70.76	81.22
TraesCS4A01G268200.1	Wheat	cytosol	70.55	80.99
HORVU4Hr1G007440.1	Barley	cytosol	70.35	76.96
TraesCS1D01G451100.1	Wheat	cytosol, plastid	64.21	74.76
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	62.99	74.76
TraesCS1B01G477300.1	Wheat	cytosol	64.42	74.47
HORVU1Hr1G094990.20	Barley	cytosol, plastid	55.01	63.59
GSMUA_Achr1P05590_001	Banana	mitochondrion	48.88	61.6
Solyc11g069310.1.1	Tomato	cytosol	26.58	61.32
PGSC0003DMT400020938	Potato	cytosol	47.65	57.67
VIT_06s0004g02990.t01	Wine grape	cytosol	47.24	57.61
KRH22907	Soybean	cytosol	46.22	55.12
KRH26430	Soybean	cytosol	45.81	54.77
KRH24883	Soybean	cytosol, plastid	45.4	54.28
AT5G60550.1	Thale cress	mitochondrion	44.99	54.05
AT3G45240.1	Thale cress	cytosol	43.76	54.04
CDY31536	Canola	cytosol	45.4	53.75
Bra002472.1-P	Field mustard	cytosol	45.4	53.75
CDX80157	Canola	cytosol	45.4	53.62
CDY09195	Canola	mitochondrion	43.15	51.84
Bra020241.1-P	Field mustard	mitochondrion	43.15	51.84
KRH29938	Soybean	mitochondrion	44.17	50.23
PGSC0003DMT400074993	Potato	cytosol, nucleus, plastid	8.59	44.21
Solyc11g069300.1.1	Tomato	cytosol	16.97	43.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	EntrezGene:8058345	UniProt:A0A1Z5RE94	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlants:OQU82027	ProteinID:OQU82027
ProteinID:OQU82027.1	ProteinID:OQU82028.1	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44241	PANTHER:PTHR44241:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	EnsemblPlantsGene:SORBI_3006G161000
SUPFAM:SSF56112	unigene:Sbi.7298	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B8B9D68	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:51893223..51900264

Molecular Weight (calculated)

54713.5 Da

IEP (calculated)

4.515

GRAVY (calculated)

-0.417

Length

489 amino acids

Sequence
(BLAST)

001: MADITDIGCC SCFSFLRKPS VPARQHQDAD AMLSEDLLKR QSAEDPDGSF YTGDDPDISF YNGDDLDRSF YNGDDPDRSF YDRDDTDYLE GSDDGPPRKS
101: SEDIIQSRTQ NGFACREIPV KETKKVFRSE DENGNKMVNQ YVHLGKIGSG SYGKVVLYRN IKDGKLYAVK VLNKPYMMKV RVVRTETAMT DVLREVSIMK
201: MLNHPNIVNL VEVIDDPNID KFYMVLEYVE GKMVCDNGLE EATARNYLRD IISGLMYLHS HEDNCHNPSS GGIIQILEFL AGVELQDDVG EAHLVGFCIR
301: NHQVSISAKT LEILDTTQSE IFHLNVIHGD IKPDNLLVTS AGNVKIGDFS VSQVFEDDDD MLWRSPGTPV FTAPECCQGS AYHGRASDTW AVGVTLYCMV
401: SGHYPFLGDT LQETYDKIAN DPVQIPGDMN PQLADLLLRL LCKDPGDRIT LQAAAEHPWV AGGEGPVPEF ICRCGFGRRK RNDVREEVQ

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.