Factsheet for Solyc11g069300.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020938	Potato	cytosol	81.68	38.61
VIT_06s0004g02990.t01	Wine grape	cytosol	54.97	26.18
GSMUA_Achr1P05590_001	Banana	mitochondrion	52.36	25.77
KRH26430	Soybean	cytosol	48.69	22.74
KRH22907	Soybean	cytosol	48.69	22.68
KRH24883	Soybean	cytosol, plastid	48.17	22.49
Bra002472.1-P	Field mustard	cytosol	47.64	22.03
CDY31536	Canola	cytosol	47.64	22.03
AT3G45240.1	Thale cress	cytosol	45.55	21.97
CDX80157	Canola	cytosol	47.12	21.74
AT5G60550.1	Thale cress	mitochondrion	45.55	21.38
KRH29938	Soybean	mitochondrion	47.64	21.16
Bra020241.1-P	Field mustard	mitochondrion	44.5	20.88
CDY09195	Canola	mitochondrion	44.5	20.88
Os03t0711300-01	Rice	cytosol	45.55	20.42
KXG37739	Sorghum	cytosol	43.98	19.72
TraesCS4A01G268200.1	Wheat	cytosol	43.46	19.48
TraesCS4B01G046100.1	Wheat	cytosol	43.46	19.48
TraesCS4D01G045900.1	Wheat	cytosol	43.46	19.48
Zm00001d025946_P003	Maize	cytosol	43.46	19.48
HORVU4Hr1G007440.1	Barley	cytosol	43.98	18.79
Zm00001d002827_P003	Maize	cytosol	40.84	18.57
TraesCS1D01G451100.1	Wheat	cytosol, plastid	38.74	17.62
TraesCS1B01G477300.1	Wheat	cytosol	38.74	17.49
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	37.7	17.48
OQU82027	Sorghum	cytosol	43.46	16.97
HORVU1Hr1G094990.20	Barley	cytosol, plastid	37.17	16.78
Solyc11g069310.1.1	Tomato	cytosol	2.09	1.89

Protein Annotations

Gene3D:3.30.200.20	MapMan:35.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K4DA86
InterPro:Kinase-like_dom_sf	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR44241	PANTHER:PTHR44241:SF1	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF56112	EnsemblPlantsGene:Solyc11g069300.1	EnsemblPlants:Solyc11g069300.1.1	UniParc:UPI000276A936	:

Description

No Description!

Coordinates

chr11:+:53922134..53923641

Molecular Weight (calculated)

21654.4 Da

IEP (calculated)

5.171

GRAVY (calculated)

-0.722

Length

191 amino acids

Sequence
(BLAST)

001: MSVMMHSVDE VTEMGCCGCF GFSFARKPKK EIRPNRGYGN SWSHEPLLQQ EAEEVEDDGF DSGDIIDTGS EDDEVCHSPV KRYQEILMER AQNGLICREI
101: PVKETHKVVR TEDEDGNKMV NEYVREHKIG AGSYGKVVLY RSCTDGKHYA IKAFHKSHLS KMRVAPSETA MGDVLREECF DHENAVPSQY S

Best Arabidopsis Sequence Match ( AT3G45240.3 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQDDDDQLRR SPGTPVFTAP ECCLGITYSG RSADTWAVGV
301: TLYCMILGQY PFLGDTLQDT YDKIVHNPLI IPEGLNPRLR DLIEGLLCKD PNQRMTLKAV AEHPWITGED GAISEYCCWC KRKAEEEEDQ NHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.