Factsheet for Solyc11g069310.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020938	Potato	cytosol	94.34	49.51
VIT_06s0004g02990.t01	Wine grape	cytosol	72.17	38.15
GSMUA_Achr1P05590_001	Banana	mitochondrion	66.51	36.34
KRH26430	Soybean	cytosol	69.34	35.94
KRH22907	Soybean	cytosol	69.34	35.85
KRH24883	Soybean	cytosol, plastid	67.92	35.21
AT5G60550.1	Thale cress	mitochondrion	66.98	34.89
AT3G45240.1	Thale cress	cytosol	65.09	34.85
CDY09195	Canola	mitochondrion	65.57	34.15
Bra020241.1-P	Field mustard	mitochondrion	65.57	34.15
KRH29938	Soybean	mitochondrion	67.92	33.49
CDY31536	Canola	cytosol	64.62	33.17
Bra002472.1-P	Field mustard	cytosol	64.62	33.17
CDX80157	Canola	cytosol	64.62	33.09
TraesCS1A01G443100.1	Wheat	cytosol, plasma membrane, plastid	60.38	31.07
Os03t0711300-01	Rice	cytosol	61.79	30.75
Zm00001d025946_P003	Maize	cytosol	61.32	30.52
TraesCS1D01G451100.1	Wheat	cytosol, plastid	60.38	30.48
Zm00001d002827_P003	Maize	cytosol	60.38	30.48
TraesCS4B01G046100.1	Wheat	cytosol	60.85	30.28
TraesCS1B01G477300.1	Wheat	cytosol	59.43	29.79
KXG37739	Sorghum	cytosol	59.43	29.58
TraesCS4A01G268200.1	Wheat	cytosol	59.43	29.58
TraesCS4D01G045900.1	Wheat	cytosol	58.96	29.34
HORVU4Hr1G007440.1	Barley	cytosol	59.43	28.19
OQU82027	Sorghum	cytosol	61.32	26.58
HORVU1Hr1G094990.20	Barley	cytosol, plastid	52.83	26.48
Solyc11g069300.1.1	Tomato	cytosol	1.89	2.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0018107
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	UniProt:K4DA87	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44241	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc11g069310.1	EnsemblPlants:Solyc11g069310.1.1	UniParc:UPI000276A937	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:53923685..53926700

Molecular Weight (calculated)

23807.5 Da

IEP (calculated)

4.544

GRAVY (calculated)

-0.287

Length

212 amino acids

Sequence
(BLAST)

001: MVLEYVEGKW VCEDSGPPCV LEENKARLYL RDIVSGLMYL HSHNIIHGDI KPDNLLVSAA GKVKIGDFSV SQVFEDDNDK LRRSPGTPVF TAPECCVGDR
101: YHGKCADTWA VGVTLYCMIL GKYPFLGETL QDTYDKIVNN PIILPDDMNP LLKNLLEGLL CKDPTQRLTL ESVCQHEWFL GDEGPIPQFS CWCQRQKLQK
201: DVQDGSAEDT PT

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.