Factsheet for GSMUA_Achr1P22030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g01140.t01	Wine grape	cytosol	48.78	55.94
GSMUA_Achr1P05590_001	Banana	mitochondrion	59.76	50.52
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	22.26	48.34

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.9	MapMan:27.3.2	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr1G22030_001	EnsemblPlants:GSMUA_Achr1P22030_001	EnsemblPlants:GSMUA_Achr1T22030_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0S211	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44241	PANTHER:PTHR44241:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029511EE	SEG:seg	:	:	:

Description

Putative Probable serine/threonine-protein kinase DDB_G0279405 [Source:GMGC_GENE;Acc:GSMUA_Achr1G22030_001]

Coordinates

chr1:-:16557076..16563738

Molecular Weight (calculated)

36237.9 Da

IEP (calculated)

6.104

GRAVY (calculated)

-0.130

Length

328 amino acids

Sequence
(BLAST)

001: MSGFVLPDSD LDVGCCGCLG FLKKPDEDVD FEKVWMLGRG RKMAPLMLPT NRPICREKPV KETKRLTLDR DASGQKMINE YVKECTIGHG SYGKVVLYRS
101: NNDGKQYAIK AFYKSRLSRL QVTSTETAMT DVFREVSIMK IIEHPNLINL IEVIDDPESD NLYMVLEYVE GSSVCGSSGT LGGIGEITSR RYLRGIIAGL
201: VYLHAHDIVH GDIKPDNLLV TREGAVKIGD FSVSHAFEDG NDVLCRSPGT PVFTAPECCL GSSYHGKVAD IWAVGVTLYC MTLGCCPFVG DSLKDTYDKI
301: VHSPLDLPKE VDPELKDLLK GLLCKGKW

Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.